Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0411.Seq
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 22/90 (24%), Positives = 41/90 (45%)
 Frame = +2

Query: 452 SSYLGYQHWKSPVQCWSLMSAVNLSTVGPISVQNGLFTQRKTVLSIRRWACSALVNVAKN 631
           S+ + Y+  K  + C+ L   V L+ V        LF++   ++S + W+ S  + V   
Sbjct: 121 STVIDYKRHKKRLLCYLLARYVALALVI-------LFSEILVIVSEQEWSFSTGLLVMIF 173

Query: 632 NGAKVYGDCPVVDVHYSHNLLGNKEVTGVN 721
           N A  Y    +V +  S   + NK++  +N
Sbjct: 174 NSALSYKASEIVVMLRSRFAILNKQIRFLN 203


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 22/90 (24%), Positives = 41/90 (45%)
 Frame = +2

Query: 452 SSYLGYQHWKSPVQCWSLMSAVNLSTVGPISVQNGLFTQRKTVLSIRRWACSALVNVAKN 631
           S+ + Y+  K  + C+ L   V L+ V        LF++   ++S + W+ S  + V   
Sbjct: 139 STVIDYKRHKKRLLCYLLARYVALALVI-------LFSEILVIVSEQEWSFSTGLLVMIF 191

Query: 632 NGAKVYGDCPVVDVHYSHNLLGNKEVTGVN 721
           N A  Y    +V +  S   + NK++  +N
Sbjct: 192 NSALSYKASEIVVMLRSRFAILNKQIRFLN 221


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 344 SRISKQFYFQIARSKGP 294
           S IS+ FY+  A S GP
Sbjct: 59  SEISENFYYLPAMSTGP 75


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 541 DGSNSGKIYCAHEAPTLHWGFPVLIPKV*RRK 446
           D  N G +   H     H+G  V +P+  RR+
Sbjct: 12  DMRNGGVVSAEHPHQHQHYGAAVQVPQGGRRR 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,952
Number of Sequences: 336
Number of extensions: 4292
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)