BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesV0411.Seq (796 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729... 29 5.6 >02_05_0226 + 26971851-26972034,26972734-26972834,26972876-26972978, 26973335-26973477,26973525-26973605,26973929-26974015, 26974097-26974239,26974746-26974896,26974973-26975095, 26975362-26975445,26975531-26975718,26976726-26976900, 26977008-26977129,26977231-26977310,26977532-26977590, 26977921-26978075,26978680-26978858,26980050-26980162, 26980243-26980413,26980552-26980680,26980756-26980856, 26980942-26981059,26981739-26981818,26983230-26983302, 26983865-26983950,26984025-26984076,26984221-26984352, 26984560-26984628,26984912-26985004,26985806-26985901, 26986710-26986808,26986894-26986986,26987459-26987608, 26988391-26988549 Length = 1323 Score = 28.7 bits (61), Expect = 5.6 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 5/45 (11%) Frame = -1 Query: 751 GFGLNETPVRVYPGNLLISEQVVGIMNVNN-----RTVSVNLCTV 632 G +E PVRV +LL SE++V + +N R V NLC++ Sbjct: 828 GLDGSEAPVRVVARSLLASERLVPVATLNKVKTPYRPVESNLCSL 872 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,307,298 Number of Sequences: 37544 Number of extensions: 479353 Number of successful extensions: 1165 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1165 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2150667972 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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