Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0411.Seq
         (796 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001625-1|AAN71380.1|  907|Drosophila melanogaster RE37361p pro...    99   8e-21
AE013599-2554|AAF57796.1|  894|Drosophila melanogaster CG6385-PA...    99   8e-21

>BT001625-1|AAN71380.1|  907|Drosophila melanogaster RE37361p
           protein.
          Length = 907

 Score = 98.7 bits (235), Expect = 8e-21
 Identities = 51/121 (42%), Positives = 75/121 (61%)
 Frame = +3

Query: 240 IRKS*LTSGTTWHTAGMVWSLRPCDLEVKLLRDSRTVYSALAKEVDDYAGWINNGGMHLS 419
           + ++ LT+GTTWHTAG++W LRP D++++LL +SR +   L +E +   GWI NGG+ ++
Sbjct: 78  LERAQLTAGTTWHTAGLLWRLRPNDVDIQLLANSRRMLQQLEEETELDPGWIQNGGIFIA 137

Query: 420 RCTVRTQEYLRLHTLGISTGNPQCSVGAS*AQ*IFPLLDPSAFKMGSLRNGRRYYRSGDG 599
               R  EY RL T+G + G     +     Q +FPLLDPSAF +G+L      Y  GDG
Sbjct: 138 HNETRLDEYRRLATVGSALGIENQVLSPEDTQKLFPLLDPSAF-VGAL------YSPGDG 190

Query: 600 L 602
           +
Sbjct: 191 V 191



 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 45/142 (31%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
 Frame = +1

Query: 193 CNTLYQLSKRGVNAVLLERAN*QAERHGTPPEWYGPFDRAIWK*NCFEIRELYTARSRKK 372
           C+TLY L++RGV AVLLERA   A   GT   W+      +W+    ++     A SR+ 
Sbjct: 62  CHTLYHLARRGVKAVLLERAQLTA---GT--TWHTA--GLLWRLRPNDVDIQLLANSRRM 114

Query: 373 *TITPDG*TMEACTYQDAR--FVHKSI----YVFIPWV-SALEIPSAVLEPHERSKSFHC 531
                +   ++    Q+      H       Y  +  V SAL I + VL P +  K F  
Sbjct: 115 LQQLEEETELDPGWIQNGGIFIAHNETRLDEYRRLATVGSALGIENQVLSPEDTQKLFPL 174

Query: 532 WTHQRSKWALYATEDGTIDPAM 597
                   ALY+  DG +DPAM
Sbjct: 175 LDPSAFVGALYSPGDGVMDPAM 196


>AE013599-2554|AAF57796.1|  894|Drosophila melanogaster CG6385-PA
           protein.
          Length = 894

 Score = 98.7 bits (235), Expect = 8e-21
 Identities = 51/121 (42%), Positives = 75/121 (61%)
 Frame = +3

Query: 240 IRKS*LTSGTTWHTAGMVWSLRPCDLEVKLLRDSRTVYSALAKEVDDYAGWINNGGMHLS 419
           + ++ LT+GTTWHTAG++W LRP D++++LL +SR +   L +E +   GWI NGG+ ++
Sbjct: 65  LERAQLTAGTTWHTAGLLWRLRPNDVDIQLLANSRRMLQQLEEETELDPGWIQNGGIFIA 124

Query: 420 RCTVRTQEYLRLHTLGISTGNPQCSVGAS*AQ*IFPLLDPSAFKMGSLRNGRRYYRSGDG 599
               R  EY RL T+G + G     +     Q +FPLLDPSAF +G+L      Y  GDG
Sbjct: 125 HNETRLDEYRRLATVGSALGIENQVLSPEDTQKLFPLLDPSAF-VGAL------YSPGDG 177

Query: 600 L 602
           +
Sbjct: 178 V 178



 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 45/142 (31%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
 Frame = +1

Query: 193 CNTLYQLSKRGVNAVLLERAN*QAERHGTPPEWYGPFDRAIWK*NCFEIRELYTARSRKK 372
           C+TLY L++RGV AVLLERA   A   GT   W+      +W+    ++     A SR+ 
Sbjct: 49  CHTLYHLARRGVKAVLLERAQLTA---GT--TWHTA--GLLWRLRPNDVDIQLLANSRRM 101

Query: 373 *TITPDG*TMEACTYQDAR--FVHKSI----YVFIPWV-SALEIPSAVLEPHERSKSFHC 531
                +   ++    Q+      H       Y  +  V SAL I + VL P +  K F  
Sbjct: 102 LQQLEEETELDPGWIQNGGIFIAHNETRLDEYRRLATVGSALGIENQVLSPEDTQKLFPL 161

Query: 532 WTHQRSKWALYATEDGTIDPAM 597
                   ALY+  DG +DPAM
Sbjct: 162 LDPSAFVGALYSPGDGVMDPAM 183


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,754,272
Number of Sequences: 53049
Number of extensions: 790970
Number of successful extensions: 1626
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)