Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0410.Seq
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 29 2.9
L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger pro... 29 2.9
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 29 2.9
Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF040655-12|AAB95039.1| 507|Caenorhabditis elegans Hypothetical... 29 3.8
Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical p... 29 5.1
U29378-3|AAA68723.2| 330|Caenorhabditis elegans Stomatin protei... 29 5.1
U29378-2|ABS19471.1| 325|Caenorhabditis elegans Stomatin protei... 29 5.1
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 29 5.1
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 29 5.1
AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein. 29 5.1
Z83233-9|CAB05766.1| 405|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z69902-11|CAA93766.2| 935|Caenorhabditis elegans Hypothetical p... 28 6.7
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL033535-1|CAB70217.1| 935|Caenorhabditis elegans Hypothetical ... 28 6.7
Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical pr... 28 8.9
AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPas... 28 8.9
AF016451-9|AAB66005.2| 524|Caenorhabditis elegans Udp-glucurono... 28 8.9
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -1
Query: 508 PANWSLSLYTSSTVRVPRIARK*PSNVCRTVIL-ISLTVLPRNCSQAVVRSSSSFMILHW 332
PAN S SL+ +RK PSN+ TV L + T L + + +S + H
Sbjct: 707 PANHSSSLFEDIKAPKATYSRKTPSNIPLTVPLSTAATALTTTTAASSGAPVNSNIQNHR 766
Query: 331 ATPVTVSGTPWAVS 290
ATP T +G P A +
Sbjct: 767 ATPST-AGAPMAAT 779
>L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger
protein protein 1,isoform c protein.
Length = 635
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -1
Query: 508 PANWSLSLYTSSTVRVPRIARK*PSNVCRTVIL-ISLTVLPRNCSQAVVRSSSSFMILHW 332
PAN S SL+ +RK PSN+ TV L + T L + + +S + H
Sbjct: 475 PANHSSSLFEDIKAPKATYSRKTPSNIPLTVPLSTAATALTTTTAASSGAPVNSNIQNHR 534
Query: 331 ATPVTVSGTPWAVS 290
ATP T +G P A +
Sbjct: 535 ATPST-AGAPMAAT 547
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -1
Query: 508 PANWSLSLYTSSTVRVPRIARK*PSNVCRTVIL-ISLTVLPRNCSQAVVRSSSSFMILHW 332
PAN S SL+ +RK PSN+ TV L + T L + + +S + H
Sbjct: 707 PANHSSSLFEDIKAPKATYSRKTPSNIPLTVPLSTAATALTTTTAASSGAPVNSNIQNHR 766
Query: 331 ATPVTVSGTPWAVS 290
ATP T +G P A +
Sbjct: 767 ATPST-AGAPMAAT 779
>Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical
protein B0464.1 protein.
Length = 531
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 339 KIMNEDELLTTACEQFLGKTVKEIKMTVLQTLEGHLRAILGTLTVEDVYKDR 494
+I +ED+L +T E+FLGK VKE T L+ ++ T+ D + +R
Sbjct: 391 EIGDEDDL-STPVEKFLGKLVKEKYSTDFYVLDKFPLSVRPFYTMPDAHDER 441
>AF040655-12|AAB95039.1| 507|Caenorhabditis elegans Hypothetical
protein T24E12.1 protein.
Length = 507
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +3
Query: 435 EGHLRAILGTLTVEDVYKDRDQFAGWYAKWLRRTSEEWESRFCPSRLRTSTTMARIWASL 614
E LR L + V + + + A Y+ + + E E R+ P LR S IWA +
Sbjct: 160 ETDLRCCLFDPEIPHVPQFKKRPANGYSLYQNQRKSE-EGRYEPW-LRLSKKKKEIWAEM 217
Query: 615 GKSQTANVKRDADVGV 662
GK A R A+ G+
Sbjct: 218 GKKVRAEQNRQAENGL 233
>Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical
protein C12C8.3b protein.
Length = 1143
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 309 PLTVTGVAQCKIMNEDELLTTACEQFLGKTVKEI---KMTVLQTLEGHLRAILGT 464
PL VA +++NE +LL CE+ G T+K+I +T T E +RA T
Sbjct: 511 PLGDIRVAVGEVVNESQLLQWQCEK-TGDTIKQIIDGIVTNATTAENEIRAAFDT 564
>Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical
protein C12C8.3a protein.
Length = 1147
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 309 PLTVTGVAQCKIMNEDELLTTACEQFLGKTVKEI---KMTVLQTLEGHLRAILGT 464
PL VA +++NE +LL CE+ G T+K+I +T T E +RA T
Sbjct: 515 PLGDIRVAVGEVVNESQLLQWQCEK-TGDTIKQIIDGIVTNATTAENEIRAAFDT 568
>Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical
protein F55H2.6 protein.
Length = 1247
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 671 SQSDTDVSVPLHVGRLRLPQAGPDPGH 591
S++ TDV VP+ G+ +PQ D GH
Sbjct: 5 SETKTDVEVPIINGKHEIPQEENDSGH 31
>Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical
protein F55H2.6 protein.
Length = 1247
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 671 SQSDTDVSVPLHVGRLRLPQAGPDPGH 591
S++ TDV VP+ G+ +PQ D GH
Sbjct: 5 SETKTDVEVPIINGKHEIPQEENDSGH 31
>U29378-3|AAA68723.2| 330|Caenorhabditis elegans Stomatin protein
1, isoform a protein.
Length = 330
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +3
Query: 444 LRAILGTLTVEDVYKDRDQFAGWYAKWLRRTSEEWESRFCPSRLRTSTTMARIWASLGKS 623
LR ILGT T+ ++ DR++ + L +E W + LR R+ + + ++
Sbjct: 160 LRTILGTHTLSEILSDREKISADMKISLDEATEPWGIKVERVELRD----VRLPSQMQRA 215
Query: 624 QTANVKRDADVGVALANRDAGIR 692
A + D G + + +R
Sbjct: 216 MAAEAEATRDAGAKIIAAEGELR 238
>U29378-2|ABS19471.1| 325|Caenorhabditis elegans Stomatin protein
1, isoform b protein.
Length = 325
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +3
Query: 444 LRAILGTLTVEDVYKDRDQFAGWYAKWLRRTSEEWESRFCPSRLRTSTTMARIWASLGKS 623
LR ILGT T+ ++ DR++ + L +E W + LR R+ + + ++
Sbjct: 160 LRTILGTHTLSEILSDREKISADMKISLDEATEPWGIKVERVELRD----VRLPSQMQRA 215
Query: 624 QTANVKRDADVGVALANRDAGIR 692
A + D G + + +R
Sbjct: 216 MAAEAEATRDAGAKIIAAEGELR 238
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 309 PLTVTGVAQCKIMNEDELLTTACEQFLGKTVKEI---KMTVLQTLEGHLRAILGT 464
PL VA +++NE +LL CE+ G T+K+I +T T E +RA T
Sbjct: 515 PLGDIRVAVGEVVNESQLLQWQCEK-TGDTIKQIIDGIVTNATTAENEIRAAFDT 568
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 309 PLTVTGVAQCKIMNEDELLTTACEQFLGKTVKEI---KMTVLQTLEGHLRAILGT 464
PL VA +++NE +LL CE+ G T+K+I +T T E +RA T
Sbjct: 511 PLGDIRVAVGEVVNESQLLQWQCEK-TGDTIKQIIDGIVTNATTAENEIRAAFDT 564
>AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein.
Length = 1247
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 671 SQSDTDVSVPLHVGRLRLPQAGPDPGH 591
S++ TDV VP+ G+ +PQ D GH
Sbjct: 5 SETKTDVEVPIINGKHEIPQEENDSGH 31
>Z83233-9|CAB05766.1| 405|Caenorhabditis elegans Hypothetical
protein K06B4.10 protein.
Length = 405
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 135 DSVDVAHFESFYSDFHDTHTALHN 64
D +D+AH ESF+++ H T T N
Sbjct: 230 DYIDLAHSESFFTNDHQTFTERDN 253
>Z69902-11|CAA93766.2| 935|Caenorhabditis elegans Hypothetical
protein C47D12.8 protein.
Length = 935
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +3
Query: 456 LGTLTVEDVYKDRDQFAGWYAKWLRRTSEEWESRFCPSRLRTSTT---MARIWASLGKSQ 626
L TL ++Y+ + + WL+ T ESR+ S R + + + R +L S+
Sbjct: 584 LQTLRQIEIYRSTNPNRSLHVYWLQYTESTEESRYLESINRETMSFELLIREQGTLLISR 643
Query: 627 TANVKRDADVGVALANRDAGIREPECEKNPIDR 725
NV R+ + ++ RD G + +P D+
Sbjct: 644 EFNVDREDAPRLKISTRDGGGARRDGAVDPRDQ 676
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = -1
Query: 646 SLFTLAVCDFPKLAQILAIVVDVLNREGQNLDSHSSDVRRSHFAYQPANWSLSLYTSSTV 467
SL TL + I ++ VL R+ ++ S + + F Y+ W +SL+ S V
Sbjct: 187 SLLTLLIL-LHATGLIFIMLASVLQRDKKSWISFTIFSLKEIFKYETLAWQISLFISGCV 245
Query: 466 RVPRIARK*PSNVCRTVIL-ISLTVLP 389
+ R + + C ++L ++ ++P
Sbjct: 246 VLYRHVLRESCDECAVIVLELAFLIVP 272
>AL033535-1|CAB70217.1| 935|Caenorhabditis elegans Hypothetical
protein C47D12.8 protein.
Length = 935
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +3
Query: 456 LGTLTVEDVYKDRDQFAGWYAKWLRRTSEEWESRFCPSRLRTSTT---MARIWASLGKSQ 626
L TL ++Y+ + + WL+ T ESR+ S R + + + R +L S+
Sbjct: 584 LQTLRQIEIYRSTNPNRSLHVYWLQYTESTEESRYLESINRETMSFELLIREQGTLLISR 643
Query: 627 TANVKRDADVGVALANRDAGIREPECEKNPIDR 725
NV R+ + ++ RD G + +P D+
Sbjct: 644 EFNVDREDAPRLKISTRDGGGARRDGAVDPRDQ 676
>Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical
protein K11D9.2b protein.
Length = 1004
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 634 T*RGTLTSVSLWLTEMPV-LGNRNVRKTPSTVKYSVDTKFVG 756
T R TL ++L + PV + N N+ + VKY D FVG
Sbjct: 555 TGRDTLRCLALGTIDTPVSVSNMNLEDSTQFVKYEQDITFVG 596
>Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical
protein K11D9.2a protein.
Length = 1059
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 634 T*RGTLTSVSLWLTEMPV-LGNRNVRKTPSTVKYSVDTKFVG 756
T R TL ++L + PV + N N+ + VKY D FVG
Sbjct: 555 TGRDTLRCLALGTIDTPVSVSNMNLEDSTQFVKYEQDITFVG 596
>AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPase
protein.
Length = 1059
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 634 T*RGTLTSVSLWLTEMPV-LGNRNVRKTPSTVKYSVDTKFVG 756
T R TL ++L + PV + N N+ + VKY D FVG
Sbjct: 555 TGRDTLRCLALGTIDTPVSVSNMNLEDSTQFVKYEQDITFVG 596
>AF016451-9|AAB66005.2| 524|Caenorhabditis elegans
Udp-glucuronosyltransferase protein51 protein.
Length = 524
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/48 (20%), Positives = 20/48 (41%)
Frame = -1
Query: 376 QAVVRSSSSFMILHWATPVTVSGTPWAVSTYSHIGFNVITSGIYVGRP 233
+ + + + ++L W + P + SH+G N Y G+P
Sbjct: 337 EKLFEDAENVILLDWLPQTDLLYDPRVIGFISHVGLNSFNEASYAGKP 384
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,232,315
Number of Sequences: 27780
Number of extensions: 464261
Number of successful extensions: 1456
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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