Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0409.Seq
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    23   3.0  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    23   3.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.2  

>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 824 IPSRRHITRCRXPSTGLLWRAQVGDFHQFRV 732
           +P R +I     PSTG  W  +V  FH+ ++
Sbjct: 50  MPKRMYI-HPDSPSTGEQWMQKVVSFHKLKL 79


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 824 IPSRRHITRCRXPSTGLLWRAQVGDFHQFRV 732
           +P R +I     PSTG  W  +V  FH+ ++
Sbjct: 50  MPKRMYI-HPDSPSTGEQWMQKVVSFHKLKL 79


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 345 LQQLGDGTYGSVVLAQ 392
           LQ++ DG YGSVV+ Q
Sbjct: 249 LQKM-DGLYGSVVIRQ 263


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 345 LQQLGDGTYGSVVLAQ 392
           LQ++ DG YGSVV+ Q
Sbjct: 249 LQKM-DGLYGSVVIRQ 263


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 625 RFWECTIGIP 596
           RFWEC   IP
Sbjct: 25  RFWECLAPIP 34


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 625 RFWECTIGIP 596
           RFWEC   IP
Sbjct: 25  RFWECLAPIP 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,945
Number of Sequences: 336
Number of extensions: 3992
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)