Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0408.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_17655| Best HMM Match : ArfGap (HMM E-Value=0.015) 67 1e-11
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37) 45 7e-05
SB_39569| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28) 30 1.6
SB_24132| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_13719| Best HMM Match : HSBP1 (HMM E-Value=0.28) 30 1.6
SB_2790| Best HMM Match : HSBP1 (HMM E-Value=0.15) 30 1.6
SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28) 30 1.6
SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_651| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_30032| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06) 30 2.1
SB_26652| Best HMM Match : HSBP1 (HMM E-Value=0.28) 30 2.1
SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0) 30 2.1
SB_15393| Best HMM Match : Peptidase_M16_C (HMM E-Value=6.6e-05) 29 2.7
SB_25641| Best HMM Match : VWA (HMM E-Value=1.4e-37) 29 4.8
SB_20803| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-06) 29 4.8
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_43473| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_29630| Best HMM Match : Sigma54_activat (HMM E-Value=1) 28 6.3
SB_51639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_39407| Best HMM Match : TIG (HMM E-Value=0) 28 6.3
SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_57352| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_23707| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=2.2) 28 8.4
SB_13485| Best HMM Match : HSBP1 (HMM E-Value=1.4) 28 8.4
SB_43413| Best HMM Match : Extensin_2 (HMM E-Value=4.3) 28 8.4
SB_30408| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_29927| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_2338| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 69.3 bits (162), Expect = 3e-12
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +3
Query: 87 DRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVR 257
++ +N L+++ K N C DC AK P WAS + GIF+CI C+G+HRNLG IS V+
Sbjct: 2 EKNRNALLELAKRPGNNTCADCGAKHPEWASASKGIFICITCSGVHRNLGTQISVVK 58
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Frame = +2
Query: 254 ESVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQ-NDMSL--ESFIRAKYEQKK 424
+S+ LD+WT E++ + + GN ++ A++ N+P +RRP+ D + E +IRAKYE+K+
Sbjct: 58 KSLRLDTWTDERLQFMIENGNEKSNAIWAKNVPICYRRPKCTDPHVLREQWIRAKYERKE 117
Query: 425 YI 430
+I
Sbjct: 118 FI 119
>SB_17655| Best HMM Match : ArfGap (HMM E-Value=0.015)
Length = 401
Score = 66.9 bits (156), Expect = 1e-11
Identities = 39/98 (39%), Positives = 57/98 (58%)
Frame = +2
Query: 161 RSTMGFMEFGYIPVHPLRWDPSESGCSHLQSESVNLDSWTPEQVVSLQQMGNSRARAVYE 340
R+ MGF+E G + +H LRW+ S+ +HL+S+ ++Q+G RA
Sbjct: 59 RAKMGFLELGSVHLHSLRWNSSQFRGTHLKSK--------------IRQLGFVDGRA--- 101
Query: 341 ANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPPQ 454
FRRPQ D ++E+FIR KYEQKK+I K+ +PPQ
Sbjct: 102 ---NGDFRRPQTDSAMEAFIRKKYEQKKFIKKDGLPPQ 136
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 45 MTSKSEKDRAKQIQDRCQNILVQMLKDEDNKYCVDCDAKG 164
M+++S++++ + Q+ Q ILV MLK+E NKYC DC AKG
Sbjct: 1 MSTRSQRNKDNK-QNANQAILVDMLKEEKNKYCADCAAKG 39
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 64.5 bits (150), Expect = 8e-11
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +3
Query: 99 NILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVR 257
+I+ Q+ + N C DC +K P W S NLG+ CI C+G+HR +GVH+S+V+
Sbjct: 87 SIVKQVQRLPGNDTCADCTSKDPTWLSTNLGVLTCIECSGVHRGMGVHVSRVQ 139
>SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37)
Length = 732
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 75 KQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNL 233
K+ ++ IL + + NK C DC +GP + + +G F+C C+GI R L
Sbjct: 6 KKQDEKNLKILRDLASQQHNKKCFDCGQRGPTYVNMTIGSFVCTSCSGILRGL 58
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = +2
Query: 254 ESVNLDSWTPEQVVSLQQMGNSRARAVY-----EANLPDSFRRPQNDMSLESFIRAKYEQ 418
+S+++ S+TP+++ LQ GN + + AN P+ R ++ ++ F+ KYE+
Sbjct: 65 KSISMTSFTPQEIEYLQGAGNEVCKKTWLGLWNSANNPEPESR--DEQKVKDFMIQKYER 122
Query: 419 KKYIAKEWVPPQLPKV 466
+++ ++PPQ V
Sbjct: 123 RRW----YIPPQQASV 134
>SB_39569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 857
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +2
Query: 257 SVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRR---PQNDMSLESFIRAKYEQKKY 427
S+ LD+W PE + + ++GNS ++YEA + ++ N E++I++KY ++
Sbjct: 310 SLTLDAWEPEHLKLMSELGNSLINSIYEAKIAGDHKKINHLSNRSDREAWIKSKYIYHRF 369
Query: 428 IA 433
++
Sbjct: 370 VS 371
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 284 EQVVSLQQMGNSRARAVYEANLPDSFR-RPQNDMSLE-SFIRAKYEQKKY 427
E VV + ++GN A + E +PD R RP D + FI AKYE KKY
Sbjct: 870 EIVVLMVKIGNENANKLLEFKIPDDDRIRPDADSAKRREFICAKYEYKKY 919
>SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 469
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 270 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLRRSGCP 449
+ GL++ +++ E GP ++ +T S+V K Y N +RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 450 RS 455
S
Sbjct: 126 ES 127
>SB_24132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 270 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLRRSGCP 449
+ GL++ +++ E GP ++ +T S+V K Y N +RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 450 RS 455
S
Sbjct: 126 ES 127
>SB_13719| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 335
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 270 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLRRSGCP 449
+ GL++ +++ E GP ++ +T S+V K Y N +RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 450 RS 455
S
Sbjct: 126 ES 127
>SB_2790| Best HMM Match : HSBP1 (HMM E-Value=0.15)
Length = 263
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 270 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLRRSGCP 449
+ GL++ +++ E GP ++ +T S+V K Y N +RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 450 RS 455
S
Sbjct: 126 ES 127
>SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 565
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 270 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLRRSGCP 449
+ GL++ +++ E GP ++ +T S+V K Y N +RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 450 RS 455
S
Sbjct: 126 ES 127
>SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 270 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLRRSGCP 449
+ GL++ +++ E GP ++ +T S+V K Y N +RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 450 RS 455
S
Sbjct: 126 ES 127
>SB_651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 270 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLRRSGCP 449
+ GL++ +++ E GP ++ +T S+V K Y N +RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNIRVSGIP 125
Query: 450 RS 455
S
Sbjct: 126 ES 127
>SB_30032| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06)
Length = 819
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 679 VLLVSGCAGRRAPTELRN*LKILVSVCSVSRRT 581
VL +SGC + A T R +K LVS+C V T
Sbjct: 116 VLYISGCEVKSAKTMTREYVKALVSLCEVLTMT 148
>SB_26652| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 335
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 270 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLRRSGCP 449
+ GL++ +++ E GP ++ +T S+V K Y N +RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YFENQSRRNNIRVSGIP 125
Query: 450 RS 455
S
Sbjct: 126 ES 127
>SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0)
Length = 758
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +2
Query: 275 WTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAKEWVPPQ 454
W VS++Q+ N + + + NL + +++M E+ + + KKY+ + PP+
Sbjct: 209 WDTRTDVSIEQIKNHKPHDISDDNLIPLRKPDRDEMFRENMKEYEEQAKKYVKPKKGPPK 268
Query: 455 L 457
L
Sbjct: 269 L 269
>SB_15393| Best HMM Match : Peptidase_M16_C (HMM E-Value=6.6e-05)
Length = 683
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 102 ILVQMLKDEDNKYCVDCDAKGPRWASWN--LGIFLCIRCAGIHRNLGVHISKV 254
I +Q+LKD N+Y D + G + N GIF+ IR G + G+ + K+
Sbjct: 171 IFLQLLKDSLNEYAYDAEIAGVTYNLDNTMYGIFMSIR--GYNHKQGILMEKI 221
>SB_25641| Best HMM Match : VWA (HMM E-Value=1.4e-37)
Length = 279
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = -2
Query: 688 PLDVLLV---SGCAGRRAPTELRN*LKILVSVCSVS 590
P+D+ + SG GRR+ E++N +K +V +C +S
Sbjct: 88 PIDIAFLLDASGSIGRRSWEEIKNFVKSIVDMCDIS 123
>SB_20803| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-06)
Length = 563
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 270 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLRRSGCP 449
+ GL++ +++ E GP ++ +T S+V K Y N +RRN R SG P
Sbjct: 37 VSGLKAS-LEFTQSEVERFGPINKKVKETDSEVVKVKDALE--YLENQSRRNNKRVSGIP 93
Query: 450 RS 455
S
Sbjct: 94 ES 95
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +3
Query: 333 CTRRTYQTRSDVHKTTCPW--NRSYAPNTNRRNT 428
C+R+ Q HKTTC W + +Y P + T
Sbjct: 160 CSRKCQQQHWPQHKTTCTWKISTTYTPEAHSTET 193
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 351 QTRSDVHKTTCPWNRSYAPNTNRRNTLRRSGCP 449
Q R+ H +TCP Y + RN S CP
Sbjct: 1375 QNRNGKHSSTCPSVLQYVDHIQNRNGKHSSTCP 1407
>SB_43473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +3
Query: 324 PGPCTRRTYQTRSDVHKTTCPWNR---SYAPNTNRRNTLRRSGCPRSCPKS 467
PG C R D CP N Y P T N LR P +CP +
Sbjct: 40 PGACPNNNL--RGDYDPGACPNNNLRGDYDPGTRPNNNLRGDYDPGACPNN 88
>SB_29630| Best HMM Match : Sigma54_activat (HMM E-Value=1)
Length = 1118
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/79 (25%), Positives = 35/79 (44%)
Frame = +2
Query: 179 MEFGYIPVHPLRWDPSESGCSHLQSESVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDS 358
M+F YI LR + C+H E +W +V + G + R VYE +
Sbjct: 221 MQFNYIVRQRLRRVEEQGSCTHSDEERAFTGTWCHPEVFKALEKGYTVLR-VYEVWHWEQ 279
Query: 359 FRRPQNDMSLESFIRAKYE 415
+ R + +++F++ K E
Sbjct: 280 WHRLFEEY-IKTFLKYKQE 297
>SB_51639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +3
Query: 39 IEMTSKSEKDRAKQI--QDRCQ--NILVQMLKDEDNKYCVDCDA 158
++ ++S+ D A I + RC N ++ K E NKYC DC A
Sbjct: 14 LQTLARSQLDSAIDIKKEPRCLVLNAAERIRKVEGNKYCADCSA 57
>SB_39407| Best HMM Match : TIG (HMM E-Value=0)
Length = 1710
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 215 WDPSESGCSHLQSESVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLE 391
W P+ S L++ +LD+ V++ Q N+R+R VY+ F P++ MSLE
Sbjct: 353 WLPTNISDSDLEAALNSLDALRDMGNVTVTQSSNNRSR-VYKVGF--VFENPEDAMSLE 408
>SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 285 SKWCRYSKWETAAPGPCTRRTYQTRSDVHK 374
+KWC Y K T + G C R +Q + D K
Sbjct: 231 TKWCNYHKSSTHSDGECKR--HQQKGDTTK 258
>SB_57352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +3
Query: 261 SISIRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTN--RRNTLR 434
SIS+ + S + A+P PC RT S + W +P RR + R
Sbjct: 43 SISMGKTPKRKLSLSNCDNASPSPCFLRTMSNESGYCPDSPMWPSCESPTIELLRRPSFR 102
Query: 435 R-SGCPRSCPKS 467
R + P C +S
Sbjct: 103 RWNSSPAGCDES 114
>SB_23707| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=2.2)
Length = 445
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 281 ESTNRD*HSHFGDVNTQIPMDPSA 210
ES+N+ HS FGDV P+ PS+
Sbjct: 3 ESSNKTPHSVFGDVTPTGPLSPSS 26
>SB_13485| Best HMM Match : HSBP1 (HMM E-Value=1.4)
Length = 193
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 270 IRGLQSKWCRYSKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLRRSGCP 449
+ GL++ +++ E GP + +T S+V + Y N +RRN +R SG P
Sbjct: 69 VSGLKAS-LEFTQKEVERFGPINKEVKETDSEVVEVKDALE--YLENQSRRNNIRVSGIP 125
Query: 450 RS 455
S
Sbjct: 126 ES 127
>SB_43413| Best HMM Match : Extensin_2 (HMM E-Value=4.3)
Length = 529
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 281 ESTNRD*HSHFGDVNTQIPMDPSA 210
ES+N+ HS FGDV P+ PS+
Sbjct: 444 ESSNKTPHSVFGDVTPTGPLSPSS 467
>SB_30408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 333 CTRRTYQTRSDVHKTTCPWNRSYAPNTNRR 422
C ++T+ S PWN +A + NRR
Sbjct: 154 CKKKTFLQTSKTQNEPSPWNAKHAMDINRR 183
>SB_29927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Frame = +1
Query: 397 HTRQIRTEEIHCEGV--GAPA------AAQSQLG*RNRRRDGSTERKKKSATSSLGPLPA 552
H RQ +++ HC+GV G A A+ S+ +N ++ KS SS+G L +
Sbjct: 729 HKRQTESDKKHCQGVLLGVSAIFSTVKASVSKRLSKNVQKHADIVMLAKSKLSSIGDLIS 788
Query: 553 PAVADKK 573
A+ DK+
Sbjct: 789 KALTDKQ 795
>SB_2338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1289
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 194 IPVHPLRWDPSESGCSHLQSESVNLDSWTPEQVVSLQQMGN 316
+PV P+ DPSE G S Q E + +SW + +L G+
Sbjct: 693 VPVPPVNMDPSEYG-SWFQ-EKTSAESWAEQTTAALSLDGS 731
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,050,460
Number of Sequences: 59808
Number of extensions: 503299
Number of successful extensions: 1605
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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