Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0408.Seq
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.1  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   3.7  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   6.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.4  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   8.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.5  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   8.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.5  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 451 AAAQSQLG*RNRRRDGSTERKKKSATSSLGPLP 549
           AAA  Q   RN       E K+  +T SL PLP
Sbjct: 534 AAAAGQPSKRNGGETNKQELKRLKSTVSLLPLP 566


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 203 HPLRWDPSE-SGCSHLQSESVNLDSWTPEQVV 295
           H  +WDP+E  G + L   S ++  W P+ V+
Sbjct: 80  HKFQWDPAEYGGVTELYVPSEHI--WLPDIVL 109


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 432 RRSGCPRSCPKSTGIKK*TKRWIDRKEK 515
           R++ CP  C    G  + + +++ R+E+
Sbjct: 343 RKNNCPLHCKPELGQSQSSPKFVARREE 370


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/51 (21%), Positives = 23/51 (45%)
 Frame = +3

Query: 126 EDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVRVSISIRG 278
           +D +YC     +  +W +   G+F  +    + R  G+H +K  ++    G
Sbjct: 469 QDREYC----PRYIKWTNRERGVFKLVDSKAVSRLWGLHKNKPDMNYETMG 515


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -3

Query: 294 TTCSGVHESRLTLSLW 247
           T+ +G+H  ++ LS+W
Sbjct: 56  TSKAGIHRKKVLLSVW 71


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 508 RKKKSATSSLGPLPAPAVADKK 573
           RK + A  + GP   P V +KK
Sbjct: 193 RKGRGAIGAYGPEKGPKVPEKK 214


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -3

Query: 294 TTCSGVHESRLTLSLW 247
           T+ +G+H  ++ LS+W
Sbjct: 178 TSKAGIHRKKVLLSVW 193


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/46 (17%), Positives = 20/46 (43%)
 Frame = +2

Query: 362 RRPQNDMSLESFIRAKYEQKKYIAKEWVPPQLPKVNWDKEIDEEMD 499
           ++PQ     +   + + +Q++   + W   + P  +W    D  +D
Sbjct: 438 QQPQQQQQQQQQQQQQQQQQQQQQQHWPMEEEPAASWGSASDVTLD 483


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,520
Number of Sequences: 438
Number of extensions: 4740
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)