Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0408.Seq
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g54310.1 68418.m06764 ARF GAP-like zinc finger-containing pro... 89 3e-18
At3g17660.1 68416.m02255 human Rev interacting-like family prote... 85 3e-17
At3g07940.1 68416.m00971 zinc finger and C2 domain protein, puta... 77 9e-15
At4g05330.1 68417.m00815 zinc finger and C2 domain protein, puta... 74 8e-14
At1g60860.1 68414.m06851 ARF GTPase-activating domain-containing... 73 1e-13
At4g21160.4 68417.m03061 zinc finger and C2 domain protein (ZAC)... 73 2e-13
At4g21160.3 68417.m03060 zinc finger and C2 domain protein (ZAC)... 73 2e-13
At4g21160.2 68417.m03059 zinc finger and C2 domain protein (ZAC)... 73 2e-13
At4g21160.1 68417.m03058 zinc finger and C2 domain protein (ZAC)... 73 2e-13
At4g17890.1 68417.m02666 human Rev interacting-like family prote... 73 2e-13
At5g61980.1 68418.m07779 ARF GTPase-activating domain-containing... 72 4e-13
At1g10870.1 68414.m01249 ARF GTPase-activating domain-containing... 72 4e-13
At5g46750.1 68418.m05759 human Rev interacting-like family prote... 71 7e-13
At2g35210.2 68415.m04318 human Rev interacting-like family prote... 71 1e-12
At2g35210.1 68415.m04319 human Rev interacting-like family prote... 71 1e-12
At5g13300.1 68418.m01528 ARF GTPase-activating domain-containing... 70 1e-12
At2g37550.1 68415.m04605 arabidopsis pde1 suppressor 1 protein (... 68 5e-12
At3g53710.1 68416.m05933 ARF GAP-like zinc finger-containing pro... 67 9e-12
At1g08680.2 68414.m00965 ARF GAP-like zinc finger-containing pro... 48 6e-06
At1g08680.1 68414.m00964 ARF GAP-like zinc finger-containing pro... 48 6e-06
At4g13350.2 68417.m02088 human Rev interacting-like protein-rela... 47 1e-05
At4g13350.1 68417.m02087 human Rev interacting-like protein-rela... 47 1e-05
At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family... 29 3.9
At4g25640.1 68417.m03692 MATE efflux family protein similar to r... 28 5.2
At1g09770.1 68414.m01096 myb family transcription factor contain... 28 5.2
At4g02450.1 68417.m00332 glycine-rich protein similar to several... 28 6.8
At1g50260.1 68414.m05635 C2 domain-containing protein low simila... 28 6.8
At5g43210.1 68418.m05280 endo/excinuclease amino terminal domain... 27 9.0
At5g25752.1 68418.m03053 rhomboid family protein contains Pfam p... 27 9.0
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 27 9.0
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 27 9.0
At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) / po... 27 9.0
>At5g54310.1 68418.m06764 ARF GAP-like zinc finger-containing
protein ZIGA3 (ZIGA3) nearly identical to ARF GAP-like
zinc finger-containing protein ZIGA3 GI:10441352 from
[Arabidopsis thaliana]; contains InterPro accession
IPR001164: Human Rev interacting-like protein (hRIP)
Length = 483
Score = 89.0 bits (211), Expect = 3e-18
Identities = 37/62 (59%), Positives = 49/62 (79%)
Frame = +3
Query: 72 AKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISK 251
+K++ R + IL +LK +N+ C DC KGPRWAS NLGIF+C++C+GIHR+LGVHISK
Sbjct: 8 SKELNARHRKILEGLLKHPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHISK 67
Query: 252 VR 257
VR
Sbjct: 68 VR 69
Score = 64.1 bits (149), Expect = 9e-11
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = +2
Query: 257 SVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKYEQKKYIAK 436
S LD+W PEQV +Q MGN +A + +EA LP ++ R + +E+FIRAKYE+K+++++
Sbjct: 70 SATLDTWLPEQVAFIQSMGNDKANSYWEAELPPNYDR----VGIENFIRAKYEEKRWVSR 125
Query: 437 EWVPPQLPKVNWDK 478
P+V ++
Sbjct: 126 GEKARSPPRVEQER 139
>At3g17660.1 68416.m02255 human Rev interacting-like family protein
/ hRIP family protein similar to ARF GAP-like zinc
finger-containing protein ZIGA3 GI:10441352 from
[Arabidopsis thaliana]; contains InterPro accession
IPR001164: Human Rev interacting-like protein (hRIP)
Length = 117
Score = 85.4 bits (202), Expect = 3e-17
Identities = 35/62 (56%), Positives = 48/62 (77%)
Frame = +3
Query: 72 AKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISK 251
+K++ + IL +LK DN+ C DC +K PRWAS NLGIF+C++C+GIHR+LGVHIS+
Sbjct: 8 SKELNAKHSKILEALLKHPDNRECADCRSKAPRWASVNLGIFICMQCSGIHRSLGVHISQ 67
Query: 252 VR 257
VR
Sbjct: 68 VR 69
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 248 QSESVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRRPQNDMSLESFIRAKY 412
Q S+ LD+W P+QV ++ GN++ +E+ LP F R +D +FIRAKY
Sbjct: 67 QVRSITLDTWLPDQVAFMKSTGNAKGNEYWESELPQHFERSSSD----TFIRAKY 117
>At3g07940.1 68416.m00971 zinc finger and C2 domain protein,
putative similar to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana];contains Pfam
profile: PF01412 Putative GTP-ase activating protein for
Arf
Length = 385
Score = 77.4 bits (182), Expect = 9e-15
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +3
Query: 105 LVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKV 254
L ++LK NKYC DC + P+W S +LG+F+CI+C+G+HR+LGVHISKV
Sbjct: 50 LEKLLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKV 99
>At4g05330.1 68417.m00815 zinc finger and C2 domain protein,
putative similar to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 336
Score = 74.1 bits (174), Expect = 8e-14
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 114 MLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKV 254
+L DN+ C DC A P+WAS N+G+F+C++C G+HR+LG HISKV
Sbjct: 21 LLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISKV 67
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Frame = +2
Query: 257 SVNLDSWTPEQVVSLQQMG-NSRARAVYEANLPDSFRRPQNDMSLES---FIRAKYEQKK 424
SV LD W+ E+V S+ ++G N+ A ++YEA LPD+ +P D++ + FIRAKYE ++
Sbjct: 69 SVTLDEWSDEEVDSMIEIGGNASANSIYEAFLPDTCSKPGPDVNHDQRMRFIRAKYELQE 128
Query: 425 YI 430
++
Sbjct: 129 FL 130
>At1g60860.1 68414.m06851 ARF GTPase-activating domain-containing
protein
Length = 776
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = +3
Query: 27 SG*IIEMTSKSEKDRAKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCI 206
SG E + ++K+ Q + ++L + + N C +C+A P WAS NLG+ +CI
Sbjct: 444 SGPATENLTLNQKEDYNQRLNVGDDVLTILREIPGNNTCAECNAPDPDWASLNLGVLMCI 503
Query: 207 RCAGIHRNLGVHISKVR 257
C+G+HRNLGVHISKVR
Sbjct: 504 ECSGVHRNLGVHISKVR 520
>At4g21160.4 68417.m03061 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 72.9 bits (171), Expect = 2e-13
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 114 MLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKV 254
+L DN+ C DC A P+WAS N+G+F+C++C G+HR+LG HISKV
Sbjct: 21 LLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKV 67
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Frame = +2
Query: 239 SHLQSE-SVNLDSWTPEQVVSLQQMG-NSRARAVYEANLPDSFRRPQNDMSLES---FIR 403
SH+ SV LD W+ E+V S+ ++G N+ A ++YEA +P+ +P D S + FIR
Sbjct: 62 SHISKVLSVTLDEWSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMRFIR 121
Query: 404 AKYEQKKYI 430
+KYE ++++
Sbjct: 122 SKYEHQEFL 130
>At4g21160.3 68417.m03060 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 72.9 bits (171), Expect = 2e-13
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 114 MLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKV 254
+L DN+ C DC A P+WAS N+G+F+C++C G+HR+LG HISKV
Sbjct: 21 LLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKV 67
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Frame = +2
Query: 239 SHLQSE-SVNLDSWTPEQVVSLQQMG-NSRARAVYEANLPDSFRRPQNDMSLES---FIR 403
SH+ SV LD W+ E+V S+ ++G N+ A ++YEA +P+ +P D S + FIR
Sbjct: 62 SHISKVLSVTLDEWSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMRFIR 121
Query: 404 AKYEQKKYI 430
+KYE ++++
Sbjct: 122 SKYEHQEFL 130
>At4g21160.2 68417.m03059 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 72.9 bits (171), Expect = 2e-13
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 114 MLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKV 254
+L DN+ C DC A P+WAS N+G+F+C++C G+HR+LG HISKV
Sbjct: 21 LLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKV 67
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Frame = +2
Query: 239 SHLQSE-SVNLDSWTPEQVVSLQQMG-NSRARAVYEANLPDSFRRPQNDMSLES---FIR 403
SH+ SV LD W+ E+V S+ ++G N+ A ++YEA +P+ +P D S + FIR
Sbjct: 62 SHISKVLSVTLDEWSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMRFIR 121
Query: 404 AKYEQKKYI 430
+KYE ++++
Sbjct: 122 SKYEHQEFL 130
>At4g21160.1 68417.m03058 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 72.9 bits (171), Expect = 2e-13
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 114 MLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKV 254
+L DN+ C DC A P+WAS N+G+F+C++C G+HR+LG HISKV
Sbjct: 21 LLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKV 67
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Frame = +2
Query: 239 SHLQSE-SVNLDSWTPEQVVSLQQMG-NSRARAVYEANLPDSFRRPQNDMSLES---FIR 403
SH+ SV LD W+ E+V S+ ++G N+ A ++YEA +P+ +P D S + FIR
Sbjct: 62 SHISKVLSVTLDEWSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMRFIR 121
Query: 404 AKYEQKKYI 430
+KYE ++++
Sbjct: 122 SKYEHQEFL 130
>At4g17890.1 68417.m02666 human Rev interacting-like family protein
/ hRIP family protein contains InterPro accession
IPR001164: Human Rev interacting-like protein (hRIP)
Length = 413
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +3
Query: 96 QNILVQMLKDE-DNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVR 257
+NI+ + LK + +NK C DC AK P WAS GIFLCI C+ HRNLGVHIS VR
Sbjct: 12 KNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISFVR 66
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 257 SVNLDSWTPEQVVSLQQMGNSRARAVYE 340
S NLDSW+PEQ+ ++ GN+RA+ ++
Sbjct: 67 STNLDSWSPEQLRTMMFGGNNRAQVFFK 94
>At5g61980.1 68418.m07779 ARF GTPase-activating domain-containing
protein similar to GCN4-complementing protein (GCP1)
GI:6465806 from [Arabidopsis thaliana]
Length = 850
Score = 71.7 bits (168), Expect = 4e-13
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +3
Query: 132 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVR 257
N+ C DC A P WAS NLG+ +CI C+GIHRNLGVHISKVR
Sbjct: 532 NERCADCGAPEPDWASLNLGVLICIECSGIHRNLGVHISKVR 573
>At1g10870.1 68414.m01249 ARF GTPase-activating domain-containing
protein
Length = 775
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +3
Query: 132 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVRVSISI 272
N C +C+A P WAS NLG+ LCI+C+G+HRNLGVHISKVR S+S+
Sbjct: 479 NNACAECNAPEPDWASLNLGVLLCIQCSGVHRNLGVHISKVR-SLSL 524
>At5g46750.1 68418.m05759 human Rev interacting-like family protein
/ hRIP family protein contains Pfam profile PF01412:
Putative GTP-ase activating protein for Arf
Length = 402
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +3
Query: 96 QNILVQMLKDE-DNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVR 257
+N++ + LK + +NK C DC AK P WAS GIFLCI C+ +HR+LGVHIS VR
Sbjct: 9 KNVVFRKLKSKSENKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHISFVR 63
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 257 SVNLDSWTPEQVVSLQQMGNSRARAVYE 340
S NLDSW+PEQ+ ++ GN+RA+ ++
Sbjct: 64 STNLDSWSPEQLRTMMFGGNNRAQVFFK 91
>At2g35210.2 68415.m04318 human Rev interacting-like family protein
/ hRIP family protein similar to ARFGAP1 protein
GI:7211442 from [Homo sapiens]; contains InterPro
accession IPR001164: Human Rev interacting-like protein
(hRIP)
Length = 371
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = +3
Query: 99 NILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVR 257
++ ++ DNK C DC+AK P WAS GIFLCI C+ +HR+LGVHIS VR
Sbjct: 11 SVFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVR 63
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 257 SVNLDSWTPEQVVSLQQMGNSRARAVYE 340
S NLDSW+ EQ+ + GN+RA+ ++
Sbjct: 64 STNLDSWSSEQLKMMIYGGNNRAQVFFK 91
>At2g35210.1 68415.m04319 human Rev interacting-like family protein
/ hRIP family protein similar to ARFGAP1 protein
GI:7211442 from [Homo sapiens]; contains InterPro
accession IPR001164: Human Rev interacting-like protein
(hRIP)
Length = 395
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = +3
Query: 99 NILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVR 257
++ ++ DNK C DC+AK P WAS GIFLCI C+ +HR+LGVHIS VR
Sbjct: 11 SVFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVR 63
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 257 SVNLDSWTPEQVVSLQQMGNSRARAVYE 340
S NLDSW+ EQ+ + GN+RA+ ++
Sbjct: 64 STNLDSWSSEQLKMMIYGGNNRAQVFFK 91
>At5g13300.1 68418.m01528 ARF GTPase-activating domain-containing
protein similar to GCN4-complementing protein (GCP1)
GI:6465806 from [Arabidopsis thaliana]
Length = 768
Score = 70.1 bits (164), Expect = 1e-12
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +3
Query: 132 NKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVR 257
N C DC A P WAS NLG+ +CI C+G+HRNLGVHISKVR
Sbjct: 454 NDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVR 495
>At2g37550.1 68415.m04605 arabidopsis pde1 suppressor 1 protein
(ASP1) identical to arabidopsis pde1 suppressor 1 (Asp1)
from GI:4519792 [Arabidopsis thaliana]; contains
InterPro accession IPR001164: Human Rev interacting-like
protein (hRIP)
Length = 456
Score = 68.1 bits (159), Expect = 5e-12
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +3
Query: 129 DNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVR 257
+NK CVDC K P+WAS + GIF+C+ C+G HR LGVHIS VR
Sbjct: 15 ENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVR 57
>At3g53710.1 68416.m05933 ARF GAP-like zinc finger-containing
protein ZIGA2 (ZIGA2) nearly identical to ARF GAP-like
zinc finger-containing protein ZIGA2 from GI:10441356
[Arabidopsis thaliana]; contains InterPro accession
IPR001164: Human Rev interacting-like protein (hRIP)
Length = 459
Score = 67.3 bits (157), Expect = 9e-12
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +3
Query: 129 DNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVR 257
+NK CVDC K P+WAS + GIF+C+ C+G HR LGVHIS VR
Sbjct: 15 ENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVR 57
>At1g08680.2 68414.m00965 ARF GAP-like zinc finger-containing
protein ZiGA4 (ZIGA4) nearly identical to ARF GAP-like
zinc finger-containing protein ZiGA4 GI:10441354 from
[Arabidopsis thaliana]; contains InterPro accession
IPR001164: Human Rev interacting-like protein (hRIP)
Length = 648
Score = 48.0 bits (109), Expect = 6e-06
Identities = 18/64 (28%), Positives = 38/64 (59%)
Frame = +3
Query: 72 AKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISK 251
+K+ ++R + I+ ++K N+ C++C++ GP++ F+C+ C+GIHR +
Sbjct: 4 SKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHRVKS 63
Query: 252 VRVS 263
V +S
Sbjct: 64 VSMS 67
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +2
Query: 254 ESVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRR-PQNDMS--LESFIRAKYEQKK 424
+SV++ +T ++V LQ GN RAR +Y N +R P+N + + FI+ Y QKK
Sbjct: 62 KSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKK 121
Query: 425 Y 427
Y
Sbjct: 122 Y 122
>At1g08680.1 68414.m00964 ARF GAP-like zinc finger-containing
protein ZiGA4 (ZIGA4) nearly identical to ARF GAP-like
zinc finger-containing protein ZiGA4 GI:10441354 from
[Arabidopsis thaliana]; contains InterPro accession
IPR001164: Human Rev interacting-like protein (hRIP)
Length = 649
Score = 48.0 bits (109), Expect = 6e-06
Identities = 18/64 (28%), Positives = 38/64 (59%)
Frame = +3
Query: 72 AKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHISK 251
+K+ ++R + I+ ++K N+ C++C++ GP++ F+C+ C+GIHR +
Sbjct: 4 SKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHRVKS 63
Query: 252 VRVS 263
V +S
Sbjct: 64 VSMS 67
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +2
Query: 254 ESVNLDSWTPEQVVSLQQMGNSRARAVYEANLPDSFRR-PQNDMS--LESFIRAKYEQKK 424
+SV++ +T ++V LQ GN RAR +Y N +R P+N + + FI+ Y QKK
Sbjct: 62 KSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKK 121
Query: 425 Y 427
Y
Sbjct: 122 Y 122
>At4g13350.2 68417.m02088 human Rev interacting-like protein-related
/ hRIP protein-related similar to SP|P52594
Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
(Rev interacting protein) (Rev/Rex activation
domain-binding protein) {Homo sapiens}; contains Pfam
profile PF01412: Putative GTPase activating protein for
Arf
Length = 602
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +3
Query: 69 RAKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHIS 248
R K+ ++ + I+ +LK +NK C++C++ GP++ F+C C+GIHR +
Sbjct: 4 RVKE-DEKNEKIIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREFTHRVK 62
Query: 249 KVRVS 263
+ ++
Sbjct: 63 SISMA 67
>At4g13350.1 68417.m02087 human Rev interacting-like protein-related
/ hRIP protein-related similar to SP|P52594
Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
(Rev interacting protein) (Rev/Rex activation
domain-binding protein) {Homo sapiens}; contains Pfam
profile PF01412: Putative GTPase activating protein for
Arf
Length = 602
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +3
Query: 69 RAKQIQDRCQNILVQMLKDEDNKYCVDCDAKGPRWASWNLGIFLCIRCAGIHRNLGVHIS 248
R K+ ++ + I+ +LK +NK C++C++ GP++ F+C C+GIHR +
Sbjct: 4 RVKE-DEKNEKIIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREFTHRVK 62
Query: 249 KVRVS 263
+ ++
Sbjct: 63 SISMA 67
>At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family
protein similar to SWISS-PROT:Q15428
Length = 277
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = +3
Query: 156 AKGPRWASWNLGIFLCIRCAGIHRNLGVHISKVRVSISIRGLQSKWCRYSKWETAAPGPC 335
AK P + +LG + C C +H N G +++ + L + R +K P P
Sbjct: 39 AKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTKPQPL 98
Query: 336 TRRTYQTRS-DVHKTTCPWNRSYAPNTNRRNTL 431
R R+ + + + Y P +R+ L
Sbjct: 99 KRNVSVRRTVKIGRPGYRVTKQYDPELQQRSLL 131
>At4g25640.1 68417.m03692 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family
Length = 488
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 455 LPKVNWDKEIDEEMDRQK 508
L K NW+KE++E M+R K
Sbjct: 457 LYKTNWNKEVEETMERMK 474
>At1g09770.1 68414.m01096 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 844
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 398 IRAKYEQKKYIAKEWVPPQLPKVNWDKEIDEEM 496
+R +Q K EW+ P + K W +E DE++
Sbjct: 38 VRKSAKQCKARWYEWLDPSIKKTEWTREEDEKL 70
>At4g02450.1 68417.m00332 glycine-rich protein similar to several
proteins containing a tandem repeat region such as
Plasmodium falciparum GGM tandem repeat protein
(GB:U27807)
Length = 241
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 401 RAKYEQKKYIAKEWVPPQLPKVNWDKEIDEEMDRQKG 511
+A+ E+ + + PP KV+WDK +DE+ + G
Sbjct: 81 KAEPERWNKLLRVKKPPHYVKVDWDKWVDEDDEGSAG 117
>At1g50260.1 68414.m05635 C2 domain-containing protein low
similarity to CLB1 [Lycopersicon esculentum] GI:2789434;
contains Pfam profile PF00168: C2 domain
Length = 675
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 636 SVGARLPAHPDTSKTSNGSAD 698
S+GA +P+ PDTSK S +AD
Sbjct: 607 SLGAPVPSKPDTSKGSERNAD 627
>At5g43210.1 68418.m05280 endo/excinuclease amino terminal
domain-containing protein contains Pfam domain PF01541:
Endo/excinuclease amino terminal domain
Length = 170
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1
Query: 236 TQIPMDPSAADAQEYTQIP*SPSWT 162
TQ+P+ PS++ QE ++IP S SW+
Sbjct: 32 TQVPI-PSSSSPQENSKIPKSKSWS 55
>At5g25752.1 68418.m03053 rhomboid family protein contains Pfam
profile PF01694: Rhomboid family
Length = 280
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 484 YFFIPVDFGQLRGHPLLRNVFLLFVFG-AYERFQGHVVLWTS 362
Y F+ F + L N+F L++FG E +G+ LW S
Sbjct: 119 YQFVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLS 160
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator of
chromosome condensation (RCC1) family protein similar to
hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 303 SKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLR 434
S + T+ P P +SDV K T PW S P R +LR
Sbjct: 958 SSFLTSKPIPMEPAKSLQQSDVEKGTPPWASSETPRKLSRPSLR 1001
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator of
chromosome condensation (RCC1) family protein similar to
hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 303 SKWETAAPGPCTRRTYQTRSDVHKTTCPWNRSYAPNTNRRNTLR 434
S + T+ P P +SDV K T PW S P R +LR
Sbjct: 955 SSFLTSKPIPMEPAKSLQQSDVEKGTPPWASSETPRKLSRPSLR 998
>At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) /
potassium channel protein identical to SKOR [Arabidopsis
thaliana] gi|3810676|emb|CAA11280; member of the 1 pore,
6 transmembrane (1P/6TM) Shaker K+ channel family,
PMID:11500563
Length = 828
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 493 LFVYFFIPVDFGQLRGHPLLRNVFLLFVFG 404
L+ FF P++FG RG P N+F+L + G
Sbjct: 94 LYSSFFTPLEFGFFRGLP--ENLFILDIAG 121
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,822,197
Number of Sequences: 28952
Number of extensions: 347824
Number of successful extensions: 1180
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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