Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0406.Seq
(797 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0NFU5 Cluster: ENSANGP00000030061; n=1; Anopheles gamb... 37 0.67
UniRef50_Q8MW55 Cluster: Precollagen-NG; n=2; Mytilus|Rep: Preco... 35 2.1
UniRef50_Q8I3B5 Cluster: Putative uncharacterized protein PFI016... 34 4.8
UniRef50_A0D6Z3 Cluster: Chromosome undetermined scaffold_4, who... 34 4.8
UniRef50_UPI0000E4A0B0 Cluster: PREDICTED: similar to procollage... 33 6.3
UniRef50_UPI00004983C2 Cluster: DNA primase small subunit; n=1; ... 33 6.3
UniRef50_Q90584 Cluster: Collagen alpha-1(XVII) chain; n=4; Amni... 33 6.3
UniRef50_Q6KI74 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
>UniRef50_A0NFU5 Cluster: ENSANGP00000030061; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000030061 - Anopheles gambiae
str. PEST
Length = 126
Score = 36.7 bits (81), Expect = 0.67
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Frame = -2
Query: 523 VWRRSILY-VLIIYWEHF*LVFLSLNRRLFKIALYFSFFIIFAHLCL----IFRFFFVYV 359
V+R + LY +LI++++ F L+F+ L LF + +F FIIF CL IF +F YV
Sbjct: 1 VFRLNCLYFILILHFKPFALLFV-LCHNLF-LCNFFFIFIIFNLFCLYSLFIFNYFQSYV 58
Query: 358 TIFSTKDY 335
+I T +Y
Sbjct: 59 SILITINY 66
>UniRef50_Q8MW55 Cluster: Precollagen-NG; n=2; Mytilus|Rep:
Precollagen-NG - Mytilus galloprovincialis
(Mediterranean mussel)
Length = 905
Score = 35.1 bits (77), Expect = 2.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 696 GIQAKPGSKSAPGPIRHQGPQG 761
GIQ +PG K PGP R GPQG
Sbjct: 372 GIQGRPGCKGLPGPKRPDGPQG 393
>UniRef50_Q8I3B5 Cluster: Putative uncharacterized protein PFI0160w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0160w - Plasmodium falciparum
(isolate 3D7)
Length = 3135
Score = 33.9 bits (74), Expect = 4.8
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -3
Query: 693 YFTHNLDMWYPSFTSNLIIKYAIHVFDYCLLIAGHYLGSELIQN*E*LKDLKMLCEW 523
Y HN+D W FTS I +++ + C L GH L + I N +K + +LCEW
Sbjct: 3000 YKLHNIDTWIIKFTSKTTI-FSVGLV-LCQLFGGHNLLN--IVNKNEVKVVDVLCEW 3052
>UniRef50_A0D6Z3 Cluster: Chromosome undetermined scaffold_4, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_4,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 400
Score = 33.9 bits (74), Expect = 4.8
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -2
Query: 490 IYWEHF*LVFLSLNRRLFKIALYFSFFIIFAHLCLIFRFFFVYVTIFSTK 341
+YW++ + N+ +F L +SF IFAH CL+ VY IFS K
Sbjct: 145 LYWQN-----VYKNQSVFNRYLPYSFIYIFAHACLLGLQLTVYNVIFSQK 189
>UniRef50_UPI0000E4A0B0 Cluster: PREDICTED: similar to procollagen,
type IX, alpha 1, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to procollagen, type
IX, alpha 1, partial - Strongylocentrotus purpuratus
Length = 993
Score = 33.5 bits (73), Expect = 6.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3
Query: 696 GIQAKPGSKSAPGPIRHQGPQGPVQNHSGNP 788
GI PG+ PGPI QG QG VQ + G P
Sbjct: 730 GIAGVPGTNGNPGPIGDQGEQG-VQGNKGQP 759
>UniRef50_UPI00004983C2 Cluster: DNA primase small subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA primase small
subunit - Entamoeba histolytica HM-1:IMSS
Length = 372
Score = 33.5 bits (73), Expect = 6.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 42 LYCNSYKNTIIIVLFIIHKIAFAGVGRNTKYAKHQMLQI*VQHSF*NRHIHFSLFYKSYN 221
L+ + I++ F K+ + V RN KY++ + L +SF NR++HF+ Y N
Sbjct: 21 LFFTVKQTNIVVEKFFPSKLFYQWVTRNGKYSQTRELAAFKTNSFFNRYLHFNSSYDLSN 80
>UniRef50_Q90584 Cluster: Collagen alpha-1(XVII) chain; n=4;
Amniota|Rep: Collagen alpha-1(XVII) chain - Gallus
gallus (Chicken)
Length = 1146
Score = 33.5 bits (73), Expect = 6.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 696 GIQAKPGSKSAPGPIRHQGPQGP 764
G + PG PGP+ HQGP+GP
Sbjct: 168 GDRGLPGVPGIPGPVGHQGPEGP 190
>UniRef50_Q6KI74 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma mobile|Rep: Putative uncharacterized protein
- Mycoplasma mobile
Length = 160
Score = 33.1 bits (72), Expect = 8.3
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Frame = -3
Query: 441 YLKLHYILAFLLSSLTCV*FLGFFLSMS---QYFQ-LKTISAKFN**QTF*YYNFKSQ-- 280
+L ++L FL+ S + +L F+L +S ++F L T F F YYNF
Sbjct: 30 FLNYSWVLGFLIGS--GISYLNFWLKISFNKRFFTFLNTKRKAFK--WVFIYYNFFFVLQ 85
Query: 279 ----VCILFFNSYFEIFVFYHNVNCSFCKTD*NVCACFKNCVVLKFEAF 145
+ ILF NS+ F+F+ N N N+ C ++ F
Sbjct: 86 GLIIIGILFINSFANNFIFFQNRNLKIALAPINIFTCIFGLSLIMISTF 134
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,762,617
Number of Sequences: 1657284
Number of extensions: 14013979
Number of successful extensions: 49393
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 41319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48892
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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