Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0406.Seq
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.1  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   3.7  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   4.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   6.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.6  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/44 (27%), Positives = 27/44 (61%)
 Frame = -2

Query: 613 LLFVDSRSLLRVRVDSKLRVIEGFEDVV*MVWRRSILYVLIIYW 482
           +LF+ + + L++ V   L V+ GF+D+  +V+      +++I+W
Sbjct: 229 ILFLITYATLQILVYLHLAVMLGFQDIYMIVY-----IIVVIFW 267


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/44 (27%), Positives = 27/44 (61%)
 Frame = -2

Query: 613 LLFVDSRSLLRVRVDSKLRVIEGFEDVV*MVWRRSILYVLIIYW 482
           +LF+ + + L++ V   L V+ GF+D+  +V+      +++I+W
Sbjct: 229 ILFLITYATLQILVYLHLAVMLGFQDIYMIVY-----IIVVIFW 267


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +2

Query: 626 IAYFIIRFDVKLGYHISRLWVKYW---HPSQARVEVG 727
           + Y++I+  +  G  +   WV +W   + + ARV +G
Sbjct: 67  MGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALG 103


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 702 QAKPGSKSAPGPI 740
           ++KPG K+AP P+
Sbjct: 40  KSKPGGKTAPQPV 52


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -2

Query: 469 LVFLSLNRRLFKIALYFSFFIIFAHLCLIFRFFFVYVTIFSTKDYFGQ 326
           ++  S++R   K   Y    ++   +  I  FF  +  +FS  D+F Q
Sbjct: 38  VILSSIDRPYLKSYTYIKL-VVSVLMDFIAYFFNFWTILFSRSDFFQQ 84


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 778  EWFWTGPWGPWCRIGPGADFDPGLAWM 698
            +W +   W   C+ GP +D     AW+
Sbjct: 1518 DWEYPKCWQVDCKKGPDSDKQAFAAWV 1544


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -2

Query: 445 RLFKIALYFSFFIIF--AHLCLIFRF 374
           RL+KI + FSF + F  A +C +  +
Sbjct: 31  RLYKIFVVFSFAVTFFSAWICALVNY 56


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 721 FDPGLAWMPVFYPQSRYVVPKFYIKPY 641
           ++   A  P+ YP S +  P++   PY
Sbjct: 36  YENNQALPPITYPPSDWNCPQYNAPPY 62


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 721 FDPGLAWMPVFYPQSRYVVPKFYIKPY 641
           ++   A  P+ YP S +  P++   PY
Sbjct: 27  YENNQALPPITYPPSDWNCPQYNAPPY 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,126
Number of Sequences: 336
Number of extensions: 3937
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)