Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0406.Seq
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M27495-1|AAA85449.1|  723|Drosophila melanogaster muscarinic ace...    30   4.2  
M23412-1|AAA28676.1|  788|Drosophila melanogaster protein ( Dros...    30   4.2  
AE013599-3856|AAM68310.1|  805|Drosophila melanogaster CG4356-PB...    30   4.2  
AE013599-3855|AAF47197.1|  788|Drosophila melanogaster CG4356-PA...    30   4.2  

>M27495-1|AAA85449.1|  723|Drosophila melanogaster muscarinic
           acetylcholine receptor protein.
          Length = 723

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = -1

Query: 791 FWVTGMVLDWPLGPLVPDRTWSRLRPWLGLDASILPTISI 672
           F VT ++  WPLGP+V D TW  L  +L  +AS+L  + I
Sbjct: 81  FAVTTILGYWPLGPIVCD-TWLAL-DYLASNASVLNLLII 118


>M23412-1|AAA28676.1|  788|Drosophila melanogaster protein (
           Drosophila muscarinicacetylcholine receptor mRNA,
           complete cds. ).
          Length = 788

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = -1

Query: 791 FWVTGMVLDWPLGPLVPDRTWSRLRPWLGLDASILPTISI 672
           F VT ++  WPLGP+V D TW  L  +L  +AS+L  + I
Sbjct: 161 FAVTTILGYWPLGPIVCD-TWLAL-DYLASNASVLNLLII 198


>AE013599-3856|AAM68310.1|  805|Drosophila melanogaster CG4356-PB,
           isoform B protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = -1

Query: 791 FWVTGMVLDWPLGPLVPDRTWSRLRPWLGLDASILPTISI 672
           F VT ++  WPLGP+V D TW  L  +L  +AS+L  + I
Sbjct: 161 FAVTTILGYWPLGPIVCD-TWLAL-DYLASNASVLNLLII 198


>AE013599-3855|AAF47197.1|  788|Drosophila melanogaster CG4356-PA,
           isoform A protein.
          Length = 788

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = -1

Query: 791 FWVTGMVLDWPLGPLVPDRTWSRLRPWLGLDASILPTISI 672
           F VT ++  WPLGP+V D TW  L  +L  +AS+L  + I
Sbjct: 161 FAVTTILGYWPLGPIVCD-TWLAL-DYLASNASVLNLLII 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,498,234
Number of Sequences: 53049
Number of extensions: 635678
Number of successful extensions: 1994
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)