Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0400.Seq
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical... 68 7e-12
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 32 0.41
AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical ... 30 2.2
AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical ... 30 2.2
AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical ... 30 2.2
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z74042-14|CAE11313.1| 311|Caenorhabditis elegans Hypothetical p... 29 5.1
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF016442-4|AAB65915.1| 361|Caenorhabditis elegans Serpentine re... 29 5.1
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 5.1
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 5.1
Z77656-3|CAB01140.1| 424|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL023837-3|CAB63348.2| 283|Caenorhabditis elegans Hypothetical ... 28 6.7
AF326788-1|AAK38269.1| 424|Caenorhabditis elegans CLN-3.1 protein. 28 6.7
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 28 6.7
Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical p... 28 8.9
AL021503-2|CAA16421.1| 320|Caenorhabditis elegans Hypothetical ... 28 8.9
>AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical
protein Y37D8A.17 protein.
Length = 271
Score = 68.1 bits (159), Expect = 7e-12
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +1
Query: 259 ANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVPIFLF 438
A+AAT ALRLH RI + +L+ F+ R +EDS HYL YS++F+ P + +P+ ++
Sbjct: 85 ASAATFALRLHTRIQG-QFALNAQFIQRLIIEDSFHYLVYSVVFLMAAPVSMAALPVTIY 143
Query: 439 ALLHAASYSLTILDTLGQNS 498
A LHA ++ IL G S
Sbjct: 144 AALHACTFMTKILRETGHTS 163
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +3
Query: 537 QSRNILRAAALAEIVAVPGRTHHGHCSVTAGLMSPFVYYYFVTWKYASGGTVQPQQGSRT 716
Q++N L A +EI VP S L+ PF YY F++ +YAS +Q
Sbjct: 176 QTQNALGIIACSEIFLVPLLVSLIF-SGKGSLLLPFAYYRFLSLRYASRRNPSTRQAFAQ 234
Query: 717 PRG 725
RG
Sbjct: 235 MRG 237
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 198 PLDTCSHCLTIQCRHST-KRTRERCDFSAAATSKNSSTR 311
PL TC HC C S KR R C +A+++S ++++R
Sbjct: 724 PLFTCEHCARQLCSMSNLKRHRATCKVAASSSSNSAASR 762
>AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical
protein Y66H1B.2c protein.
Length = 950
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 273 FSAAATSKNSSTRDLPLAGFHGEVLPGGQRSLFILFTH 386
F R L LA FHG+ +P G+ F + TH
Sbjct: 628 FKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTH 665
>AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical
protein Y66H1B.2b protein.
Length = 899
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 273 FSAAATSKNSSTRDLPLAGFHGEVLPGGQRSLFILFTH 386
F R L LA FHG+ +P G+ F + TH
Sbjct: 577 FKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTH 614
>AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical
protein Y66H1B.2a protein.
Length = 897
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 273 FSAAATSKNSSTRDLPLAGFHGEVLPGGQRSLFILFTH 386
F R L LA FHG+ +P G+ F + TH
Sbjct: 575 FKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTH 612
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 61 NQYGRSKSASRRHWSTKRHPSLESSHHCQ*NRRSSLGGPR 180
+ YGR ++SRR + ++ PS S+ H N R+SL P+
Sbjct: 161 DNYGREPASSRRPYPPQQPPS-TSAPHSSPNNRTSLYNPQ 199
>Z74042-14|CAE11313.1| 311|Caenorhabditis elegans Hypothetical
protein T11F9.18 protein.
Length = 311
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +1
Query: 283 RLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASY 462
+L + R ISL R+F+ +++ + H +F S+ + +I +P + +L A
Sbjct: 222 KLKASLSQRTISLQRNFLHSLYIQTAVHVIFISIPLGIFFLSFIIWIPSNMSYILTAMCT 281
Query: 463 SLTILDTL 486
L TL
Sbjct: 282 QHGSLSTL 289
>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
protein B0240.3 protein.
Length = 1093
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 270 DFSAAATSKNSSTRDLPLAGFHGEV 344
+F +TS +D+PL GFHGE+
Sbjct: 317 NFVLNSTSSFEPLKDVPLCGFHGEI 341
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +1
Query: 40 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 144
ST + LN Y ++ WS +P + H C
Sbjct: 67 STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +1
Query: 40 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 144
ST + LN Y ++ WS +P + H C
Sbjct: 67 STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101
>AF016442-4|AAB65915.1| 361|Caenorhabditis elegans Serpentine
receptor, class n protein1 protein.
Length = 361
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +1
Query: 211 VPIV*QSSVGILQSVLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIF 390
VP++ VG+ ++N S L + + I R+ ++S F ++ +L +F
Sbjct: 206 VPLLLSVVVGLAAIYVSNLCGSRL-VWKAIDRRKNNMS------FKSYETHRHLTLLALF 258
Query: 391 MNVVPNLLILVPIFLFALLHAASY 462
N++P ++I P+FL A SY
Sbjct: 259 QNLIPAVVIAFPVFLVAFSFVMSY 282
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +1
Query: 40 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 144
ST + LN Y ++ WS +P + H C
Sbjct: 67 STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +1
Query: 40 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 144
ST + LN Y ++ WS +P + H C
Sbjct: 67 STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101
>Z77656-3|CAB01140.1| 424|Caenorhabditis elegans Hypothetical
protein F07B10.1 protein.
Length = 424
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 524 GDEQTTTHNEF*PRVSRIVKEYEAACSSANKKIGTNI 414
G T+N+ +V+ V+EY + +S +GTNI
Sbjct: 368 GSAYVNTYNKIHKKVNPDVREYSLSAASMGNSLGTNI 404
>AL023837-3|CAB63348.2| 283|Caenorhabditis elegans Hypothetical
protein Y37H2C.4 protein.
Length = 283
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +1
Query: 241 ILQSVLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLIL 420
IL S A+ A+R +Q I + +L A L+ LFYSLI + +P+ L+
Sbjct: 162 ILGSSFASVIYFAIRCYQYISNQLGTLPTQSQA---LKSLQVQLFYSLILQSAIPSFLMY 218
Query: 421 VPIFLFALLHAASYSLTI 474
+P + ++ ++ +
Sbjct: 219 LPATIVYIVPMLNFGYNV 236
>AF326788-1|AAK38269.1| 424|Caenorhabditis elegans CLN-3.1 protein.
Length = 424
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 524 GDEQTTTHNEF*PRVSRIVKEYEAACSSANKKIGTNI 414
G T+N+ +V+ V+EY + +S +GTNI
Sbjct: 368 GSAYVNTYNKIHKKVNPDVREYSLSAASMGNSLGTNI 404
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 599 STTGNSHDLGERRGPEDVPRLELDQGDEQT 510
ST GNS + E ED ++ D GDE+T
Sbjct: 161 STNGNSDEKDEEIAKEDDEGIDEDDGDEET 190
>Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical
protein C35A5.3 protein.
Length = 460
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 408 FVNIGANLFICAATRRFVFLDYP*YSWSK 494
FV++G ++FI A F+F D P SW++
Sbjct: 417 FVSLGVSMFIANAISVFIFTDQP-ASWTE 444
>AL021503-2|CAA16421.1| 320|Caenorhabditis elegans Hypothetical
protein Y68A4A.3 protein.
Length = 320
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 370 LFYSLIFMNVVPNLLILVP 426
LFYSLIF + +P LL+ +P
Sbjct: 239 LFYSLIFQSAIPCLLMYLP 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,904,152
Number of Sequences: 27780
Number of extensions: 421013
Number of successful extensions: 1633
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1632
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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