Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0399.Seq
         (845 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   5.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   7.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   9.3  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 288 HWHHQKSL*RVFMSLARTMMCSIQSEKIQRVVHT 187
           +W + KSL R F     T+M +   E I  +V+T
Sbjct: 301 NWKNDKSLKRKFYLTICTIMSAAAVEHILSIVNT 334


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 646 RHIIRNLEFTESKTSIPHHGVITKMCIHAIQQCCNYTLLH 527
           RH+++ +E  +S T  PH        + A QQC    L H
Sbjct: 334 RHLLKGIERADSVTWNPH------KLLTAPQQCSTLLLRH 367


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 172 VYHSVLQFPFYQRC 131
           +YHSV + P Y+ C
Sbjct: 45  MYHSVKEEPIYESC 58


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 584 DTMMRNGCLTLCEFKIPN 637
           D M RNG  TL +F  PN
Sbjct: 645 DRMPRNGVDTLQQFLTPN 662


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -3

Query: 546 VIIRFFILIPIRSFLCLSQYKTRWHFQIFGCVFQTHVY 433
           ++++FF  +     LCL+ YK      ++  +++ H Y
Sbjct: 253 LVVQFFCSLVA---LCLTMYKLSLTEDLYFAIYEMHWY 287


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 486 KTRWHFQIFGCVF 448
           +T W+FQI G  F
Sbjct: 335 RTMWYFQICGSAF 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,158
Number of Sequences: 336
Number of extensions: 4840
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)