Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0397.Seq
         (867 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    27   0.14 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    24   1.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   1.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   4.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   4.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   4.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   7.2  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 687 KCTCPXLCSELHCSITGHAEEXSPCQ 764
           KCTCP      +C  +G+  + +PCQ
Sbjct: 361 KCTCPEGFYGKNCEFSGYDCDSNPCQ 386


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = -3

Query: 769 RTWHGXSSSACPVMLQCSSEHSXGQVHFPLHSGPWAFR 656
           RT  G     CPV  +  S+ S    H   HSG   +R
Sbjct: 42  RTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYR 79


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = -3

Query: 769 RTWHGXSSSACPVMLQCSSEHSXGQVHFPLHSGPWAFR 656
           RT  G     CPV  +  S+ S    H   HSG   +R
Sbjct: 298 RTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYR 335


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 183 TGPRELFT-MFAIAAAGHYILCSHWVSAGSCPCYRQRCSYSRHFLLYF*HKIHFKIAVT 10
           TG R+++  M  +  AG     S+   A      RQR +Y+RH +L    + H+   +T
Sbjct: 205 TGDRQIYPWMRKVHVAG----ASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLT 259


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 183 TGPRELFT-MFAIAAAGHYILCSHWVSAGSCPCYRQRCSYSRHFLLYF*HKIHFKIAVT 10
           TG R+++  M  +  AG     S+   A      RQR +Y+RH +L    + H+   +T
Sbjct: 205 TGDRQIYPWMRKVHVAG----ASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLT 259


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 183 TGPRELFT-MFAIAAAGHYILCSHWVSAGSCPCYRQRCSYSRHFLLYF*HKIHFKIAVT 10
           TG R+++  M  +  AG     S+   A      RQR +Y+RH +L    + H+   +T
Sbjct: 205 TGDRQIYPWMRKVHVAG----ASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLT 259


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 55  KMSTIAAPLSVAGTRSCGDPVRTQNV 132
           K+STIA  L V  TRS   P  T+ +
Sbjct: 36  KLSTIALALGVERTRSELIPFLTETI 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,449
Number of Sequences: 336
Number of extensions: 4460
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)