Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0397.Seq
(867 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 87 1e-17
SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1) 83 4e-16
SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 2e-15
SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 3e-15
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 78 8e-15
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 70 3e-12
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 52 8e-07
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 47 2e-05
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 36 0.032
SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 29 6.5
SB_20222| Best HMM Match : SSF (HMM E-Value=0.0045) 29 6.5
SB_25900| Best HMM Match : fn3 (HMM E-Value=2e-17) 28 8.6
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 87.4 bits (207), Expect = 1e-17
Identities = 37/72 (51%), Positives = 59/72 (81%)
Frame = +1
Query: 250 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 429
+K + +++PAAK+LVEL+++QD+EVGDGTTSV ++ +ELLK A++LV KIHP +I++G+
Sbjct: 68 LKSIGIDNPAAKILVELSKVQDDEVGDGTTSVTVLTSELLKEAEKLVSCKIHPQTIVAGW 127
Query: 430 RLACKEAVKYIQ 465
R + K A K ++
Sbjct: 128 RKSVKAAEKALE 139
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = +2
Query: 140 AAAIANIVKSSLGPVGLDKML--VDDIGDVTVTNDGATILK 256
A AI ++VKS+LGP G+DK+L G++ VTNDGATILK
Sbjct: 29 AIAIGDLVKSTLGPKGMDKILQSFGQNGNIQVTNDGATILK 69
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 474 HSNSRVTWQAVSINTAKTTMSSKLIGADADFFSEMVVDAAQAIK 605
HS+ ++ +N A+TT+SSK++ D F+++ VDA +K
Sbjct: 145 HSSDPEKFREDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRLK 188
>SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1)
Length = 131
Score = 82.6 bits (195), Expect = 4e-16
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Frame = +3
Query: 510 INTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAINILKAHGPECKGK 689
++ A T +SSKLIG DFF+ M+VDA A+K +G YPIKAIN+LKAHG K
Sbjct: 14 VSAANTALSSKLIGQQGDFFANMIVDAVMAVKRTGNKGEAKYPIKAINVLKAHGGSAKES 73
Query: 690 CTCPXLCSELHCSITGHA--EEXSPCQVRCLEFSLAKNQXEIGGS 818
L+C+I A ++ + ++ CL+F+L K + +G S
Sbjct: 74 ILVDGYA--LNCTIASQAMPKQVTNAKIACLDFTLQKAKMHLGVS 116
Score = 64.9 bits (151), Expect = 8e-11
Identities = 34/71 (47%), Positives = 42/71 (59%)
Frame = +1
Query: 643 KLLTF*KPTGRSARESVLVQXYALNCTVASQGMPKKXPHAKFAALNFXWXKTKXKLGVPG 822
K + K G SA+ES+LV YALNCT+ASQ MPK+ +AK A L+F K K LGV
Sbjct: 58 KAINVLKAHGGSAKESILVDGYALNCTIASQAMPKQVTNAKIACLDFTLQKAKMHLGVSV 117
Query: 823 PVXGSGKFEPV 855
V K E +
Sbjct: 118 VVDDPEKLEAI 128
>SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 80.6 bits (190), Expect = 2e-15
Identities = 32/75 (42%), Positives = 56/75 (74%)
Frame = +1
Query: 250 IKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 429
++ ++V+HPAAK ++E+++ QDEEVGDGTTSV+I+A E + A+ ++ ++HPT II+ Y
Sbjct: 9 LREIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAY 68
Query: 430 RLACKEAVKYIQDNL 474
RLA + + ++ +
Sbjct: 69 RLAMDDMIDILKQQI 83
>SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 79.8 bits (188), Expect = 3e-15
Identities = 32/72 (44%), Positives = 54/72 (75%)
Frame = +1
Query: 259 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 438
++V+HPAAK ++E+++ QDEEVGDGTTSV+I+A E + A+ ++ ++HPT II+ YRLA
Sbjct: 209 IQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRLA 268
Query: 439 CKEAVKYIQDNL 474
+ + ++ +
Sbjct: 269 MDDMIDILKQQI 280
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 78.2 bits (184), Expect = 8e-15
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = +1
Query: 256 MLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRL 435
M+EV+H AK++VEL++ QD E+GDGTT VV++A LL++A++L+ IHP I GY L
Sbjct: 78 MMEVDHQIAKLMVELSKSQDNEIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIADGYEL 137
Query: 436 ACKEAVKY---IQDNLTV 480
A K A+++ I DN V
Sbjct: 138 AAKIALEHMDSIADNFPV 155
Score = 57.2 bits (132), Expect = 2e-08
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 140 AAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 253
A A+A+I+K+SLGP G+DKM+V G+VTVTNDGATIL
Sbjct: 39 ARAVASILKTSLGPKGMDKMMVSPDGEVTVTNDGATIL 76
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 69.7 bits (163), Expect = 3e-12
Identities = 30/56 (53%), Positives = 46/56 (82%)
Frame = +1
Query: 298 LAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQ 465
L+++QD+EVGDGTTSV ++A+ELLK A++LV KIHP +I++G+R + K A K ++
Sbjct: 2 LSKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVKAAEKALE 57
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 474 HSNSRVTWQAVSINTAKTTMSSKLIGADADFFSEMVVDAAQAIK 605
HS+ ++ +N A+TT+SSK++ D F+++ VDA +K
Sbjct: 63 HSSDPEKFRDDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRLK 106
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/75 (36%), Positives = 48/75 (64%)
Frame = +1
Query: 244 HNIKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIIS 423
+ ++ +++HP A ++ +A QD+ GDGTTS V+I ELLK AD V +HP +
Sbjct: 164 NGVQNSQIQHPTASLIARVATAQDDITGDGTTSNVMIIGELLKQADLYVSEGLHPRLVTE 223
Query: 424 GYRLACKEAVKYIQD 468
G+ +A K+A++ +++
Sbjct: 224 GFEVAKKKALEVLEE 238
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 510 INTAKTTMSSKLIGADADFFSEMVVDAAQAIK 605
IN AKT++ +K+ AD +E+VVDA I+
Sbjct: 251 INVAKTSLRTKVRTELADLLTEVVVDAVLTIR 282
>SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8)
Length = 186
Score = 51.6 bits (118), Expect = 8e-07
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +2
Query: 140 AAAIANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATI 250
A A+A+ +++SLGP G+DKM+ GDVT+TNDGATI
Sbjct: 33 AKAVADAIRTSLGPKGMDKMIQGGNGDVTITNDGATI 69
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/35 (54%), Positives = 29/35 (82%)
Frame = +2
Query: 149 IANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATIL 253
IA+ V+++LGP G+DK++VD G T++NDGATI+
Sbjct: 667 IADAVRTTLGPRGMDKLIVDGRGKATISNDGATII 701
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 250 IKMLEVEHPAAKVLVELAQLQDEE 321
I +L++ HPAAK LV++A+ QD E
Sbjct: 701 INLLDIVHPAAKTLVDIAKSQDAE 724
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 36.3 bits (80), Expect = 0.032
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 158 IVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 256
I+K S GP GLD ML G++ +TN G+ IL+
Sbjct: 15 ILKKSFGPNGLDVMLRSSSGNILITNSGSMILE 47
>SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 519 AKTTMSSKLIGADADFFSEMVVDAAQAIKTMNP 617
A T +SSKLI +FF++MVVDA + + P
Sbjct: 28 AATALSSKLIATQKEFFAKMVVDAVMMLDELLP 60
>SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +1
Query: 361 ELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNL 474
E + A+ ++ ++HPT II+ YRLA + + ++ +
Sbjct: 3 EFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQI 40
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 7/98 (7%)
Frame = +3
Query: 492 TWQAVSINTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKA--INILKA 665
T +S +TAK K+I + FF + D ++ N NTI + A +
Sbjct: 1567 TVYGISTDTAKAESDLKIIASKLSFFEYVEYDKLTMVEYANKVKNTICQVMAPCSSTPCR 1626
Query: 666 HGPECKG-----KCTCPXLCSELHCSITGHAEEXSPCQ 764
+G C KCTC + +C SPC+
Sbjct: 1627 NGGTCNDIVDGYKCTCQEGKTGRNCEFDDSPCASSPCK 1664
>SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6)
Length = 278
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 149 IANIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILK 256
+A+ V +LGP G + ++ G +T DG T+ K
Sbjct: 79 LADAVAVTLGPKGKNVIIEQSFGGPKITKDGVTVAK 114
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 280 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIIS 423
A+++ ++A +EE GDGTT+ ++A + V +P + S
Sbjct: 127 ARLVQDVANNTNEEAGDGTTTATVLARSIATEGFLHVSKGANPQEVSS 174
>SB_20222| Best HMM Match : SSF (HMM E-Value=0.0045)
Length = 471
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = -3
Query: 688 FPLHSGPWAFRMLIALIGYIVFPLGFIVLIACAASTTISEKKSASAPISLDDMVVLAVLI 509
FP+ GPW L+ G I + + F +++C + S S +A + M + AV+I
Sbjct: 186 FPVQPGPWIDFALLLTFGGIPWQVYFQRVLSC-KTVNASRNLSLAAAVGCIIMAIPAVII 244
>SB_25900| Best HMM Match : fn3 (HMM E-Value=2e-17)
Length = 197
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 313 DEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYI 462
DE+V DG I+AAE + + + PTS+ +GY +A V+ I
Sbjct: 98 DEDVPDGAP---IVAAEAVNSTSLRINCTTLPTSVANGYVIAFNVYVESI 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,518,983
Number of Sequences: 59808
Number of extensions: 554267
Number of successful extensions: 1252
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2479240863
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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