Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0391.Seq
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    35   9e-04
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    31   0.014
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.5  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 34.7 bits (76), Expect = 9e-04
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 13/64 (20%)
 Frame = -2

Query: 415 PSRLMLPKGTYDGFPFQLFVFVXPY---------EPTPKESEPF----KSVVPDNKPFGX 275
           P  ++LPKGT  G+P  LFV +  Y           T  + + F      + PD +  G 
Sbjct: 582 PQHMLLPKGTEAGYPCHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLYPDRRSMGY 641

Query: 274 PFDR 263
           PFDR
Sbjct: 642 PFDR 645


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 30.7 bits (66), Expect = 0.014
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 415 PSRLMLPKGTYDGFPFQLFVFVXPYE 338
           P  +++PKGT +G   QLFV +  Y+
Sbjct: 583 PQHMLIPKGTPEGMKSQLFVMISNYD 608


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +3

Query: 438 MSVGIFPWXQKPLKFGHR*XVFL 506
           M   IF W QK     H   VFL
Sbjct: 788 MGYQIFDWVQKEQSLAHSVGVFL 810


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,944
Number of Sequences: 336
Number of extensions: 2743
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)