Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0389.Seq
(795 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 139 3e-33
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 138 5e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 118 5e-27
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 78 9e-15
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 53 3e-07
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 4e-04
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.1
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 2.5
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.3
SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_2716| Best HMM Match : PD40 (HMM E-Value=0.00088) 29 4.3
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.7
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_2342| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) 28 7.6
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_20320| Best HMM Match : Endonuclease_7 (HMM E-Value=0.24) 28 7.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 139 bits (336), Expect = 3e-33
Identities = 61/87 (70%), Positives = 74/87 (85%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVXDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++T+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VLTKMKETAEAYLG V +AV+TVPAY
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAY 149
Score = 132 bits (319), Expect = 3e-31
Identities = 63/68 (92%), Positives = 65/68 (95%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 243 MNP-NTQY 263
MNP NT +
Sbjct: 61 MNPENTVF 68
Score = 130 bits (315), Expect = 1e-30
Identities = 68/93 (73%), Positives = 75/93 (80%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTSTCSIF 690
+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGT S+
Sbjct: 151 HDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVL 210
Query: 691 TIEDGIFEVNPPAGEQPTLEVEDFTIALVNHFV 789
TIEDGIFEV AG+ L EDF +V+HFV
Sbjct: 211 TIEDGIFEVKSTAGD-THLGGEDFDNKMVDHFV 242
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 138 bits (334), Expect = 5e-33
Identities = 63/87 (72%), Positives = 76/87 (87%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVXDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++TIFDAKRLIGR+++DATVQ+DMK WPF+++ D KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VL KMKETAEAYLG+ V +AVITVPAY
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAY 149
Score = 130 bits (315), Expect = 1e-30
Identities = 68/94 (72%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTSTCSIF 690
NDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGT SI
Sbjct: 151 NDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSIL 210
Query: 691 TIEDG-IFEVNPPAGEQPTLEVEDFTIALVNHFV 789
TI+DG +FEV AG+ L EDF LVNHFV
Sbjct: 211 TIDDGSLFEVKSTAGD-THLGGEDFDNRLVNHFV 243
Score = 127 bits (306), Expect = 1e-29
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 243 MNP 251
+NP
Sbjct: 61 LNP 63
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 130 bits (314), Expect = 1e-30
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 243 MNP 251
MNP
Sbjct: 61 MNP 63
Score = 125 bits (302), Expect = 4e-29
Identities = 67/93 (72%), Positives = 72/93 (77%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTSTCSIF 690
NDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGT S+
Sbjct: 244 NDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVL 303
Query: 691 TIEDGIFEVNPPAGEQPTLEVEDFTIALVNHFV 789
+IEDGIFEV G+ L EDF +V+ FV
Sbjct: 304 SIEDGIFEVKSTHGD-THLGGEDFDNNMVDFFV 335
Score = 114 bits (274), Expect = 9e-26
Identities = 64/112 (57%), Positives = 73/112 (65%), Gaps = 25/112 (22%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVXDGGKPKIKVAYKGEDKTFFPEEV--- 418
P +TIFDAKRLIGR+F+D V+ DMKHW FEVV + G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 419 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
SSMVL KMKETAEAYLG V +AV+TVPAY
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 174
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +2
Query: 413 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
++SSMVL KMKETAEAYLG V +AV+TVPAY
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 242
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 511 NDSQRQATKDAG 546
NDSQRQATKDAG
Sbjct: 176 NDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 118 bits (284), Expect = 5e-27
Identities = 55/87 (63%), Positives = 70/87 (80%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVXDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++T+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
VLTKMKETAEAYLGK V +AV+TVPAY
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAY 847
Score = 115 bits (276), Expect = 5e-26
Identities = 57/93 (61%), Positives = 72/93 (77%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTSTCSIF 690
ND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGT S+
Sbjct: 849 NDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLL 907
Query: 691 TIEDGIFEVNPPAGEQPTLEVEDFTIALVNHFV 789
TI++G+FEV G+ L EDF ++ HF+
Sbjct: 908 TIDNGVFEVVATNGD-THLGGEDFDQNVMEHFI 939
Score = 100 bits (239), Expect = 2e-21
Identities = 48/63 (76%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP-N 254
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 255 TQY 263
T +
Sbjct: 764 TVF 766
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 77.8 bits (183), Expect = 9e-15
Identities = 41/90 (45%), Positives = 56/90 (62%)
Frame = +1
Query: 520 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTSTCSIFTIE 699
QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT S+ I+
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQ 242
Query: 700 DGIFEVNPPAGEQPTLEVEDFTIALVNHFV 789
G+F AG L +DF + + +
Sbjct: 243 GGMFVTMAMAGNN-RLGGQDFNARFMQYLL 271
Score = 66.9 bits (156), Expect = 2e-11
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 243 MNP-NTQY 263
+NP NT Y
Sbjct: 90 INPKNTIY 97
Score = 58.8 bits (136), Expect = 5e-09
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVXDG-GKPKIKVAYKGEDKTFFPEEVSS 424
P++TI+DAKR IG+ F + K + F V D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 425 MVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA 559
V+ K++ AE L TV AV++VPA +K + ++ SLA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPA-EFDIKQRNATVKAASLA 195
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 72.1 bits (169), Expect = 5e-13
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 QHTIFDAKRLIGRKFEDATVQADMKHWPFEVVX-DGGKPKIKVAYKGEDKTFFPEEVSSM 427
++TI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M
Sbjct: 120 KNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAM 179
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAY 508
+ T++K TAE L V + VI+VP+Y
Sbjct: 180 LFTRLKTTAEIALKTKVTDCVISVPSY 206
Score = 55.6 bits (128), Expect = 4e-08
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +1
Query: 514 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFDLGGGTSTCS 684
D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G +
Sbjct: 209 DRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVC 268
Query: 685 IFTIEDGIFEVNPPAGEQPTLEVEDFTIALVNHF 786
I G +V A E P L DF LV HF
Sbjct: 269 ITAFLKGQLKVLSTAVE-PNLGGRDFDYVLVEHF 301
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 236
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +2
Query: 368 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAH 48
Score = 52.8 bits (121), Expect = 3e-07
Identities = 38/70 (54%), Positives = 41/70 (58%), Gaps = 26/70 (37%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLD 618
ND+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLD
Sbjct: 50 NDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLD 109
Query: 619 KK--GTGERN 642
K G ERN
Sbjct: 110 KARGGKAERN 119
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTST 678
N ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G ++
Sbjct: 117 NQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTV 176
Query: 679 CSI 687
+I
Sbjct: 177 ATI 179
Score = 35.1 bits (77), Expect = 0.066
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 362 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPF 115
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 132 GKVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVAMNP-NTQYSMPNVSSDVSSKM 302
G IIAND G+R TP+ VAF+DTE+LI +V N N Q S V + + KM
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 303 L 305
L
Sbjct: 143 L 143
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 643 VLIFDLGGGTSTCSIFTIEDGIFEVNPPAGEQPTLEVEDFTIALVNHFV 789
+ ++DLGGGT SI I+ G+FEV G+ L EDF L+ +
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGD-TYLGGEDFDNTLLKFLI 49
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 141 EIIANDQGNRTTPSYVAFT-DTERL 212
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 359 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQK 538
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 539 MQ 544
Q
Sbjct: 714 SQ 715
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 249 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 151
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 427 GAYENEG-NCRSLSWQNCAECSYHGSRVLNDSQRQAT--KDAGTISGLNVLRIINEPTAA 597
GA +N + SL W C + YHG +V+ + A AG S NV+R + P A
Sbjct: 512 GATQNANESLNSLVWARCPKHKYHGYKVIRCAVAAAVCHFHAGASSRENVMRRLCVP-AG 570
Query: 598 AIAYGLDKKGTG 633
G K TG
Sbjct: 571 HTQEGHPSKRTG 582
>SB_2716| Best HMM Match : PD40 (HMM E-Value=0.00088)
Length = 248
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = -2
Query: 773 KAIVKSSTSKVGCSPAGGFTSKIPSSMVKMEHVEVPPPRSKISTFRSPVPFLSRP*AIAA 594
K + S ++ SP+G +PS V E P +S+ + ++ PF+ IA
Sbjct: 174 KIVYSPSGEEIVYSPSGEKIVYLPSDEVPSCIPESPVEKSRSAQHKASNPFVVLGEGIAE 233
Query: 593 AVGSLMIRRTFKPE 552
+G M + PE
Sbjct: 234 TLGKPMFEKNVSPE 247
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 9 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 95
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 456 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSXTTSKGQCFMSACTVASSNLRP 283
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCP 1165
>SB_2342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = -1
Query: 708 DTILDGKDGTRRSTAAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGT 544
+ +++G++ TR TAA+ ++ +ST + +S SSS S + +++ T
Sbjct: 178 EDVIEGREATRADTAADAREMADPATSTPWTFRMSPASSSSSSSSSSSSSSQEDT 232
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 50 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 226
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 227 QEPGGDEPQHTIFDA 271
G +P++T F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025)
Length = 2182
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 481 ECSYHGSRVLNDSQRQATKDAG-TISGLNVLRI 576
ECS+ GS+V+N S+R DAG ++G++ RI
Sbjct: 678 ECSF-GSKVINSSKRITIYDAGFQVTGISPSRI 709
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVXDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P H I A R++GRK +++++D +V KP + K F P+ ++S+
Sbjct: 572 PSHEIAQAWRILGRKSSRSSLESDTLE--IKVDPKDSKPTKRNILKQVASVFDPQGLASL 629
Query: 428 VLTKMK 445
+ + K
Sbjct: 630 FVLRAK 635
>SB_20320| Best HMM Match : Endonuclease_7 (HMM E-Value=0.24)
Length = 417
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 717 HLEDTILDGKDGTRRSTAAEVKDKYISFSSTLFVKTVSNR 598
HL L GK+G R + ++KYISFS + V +N+
Sbjct: 376 HLFIKKLAGKNGERINCIPNNEEKYISFSREVIVDEFTNK 415
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,977,245
Number of Sequences: 59808
Number of extensions: 663489
Number of successful extensions: 2084
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2074
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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