Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0389.Seq
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   1.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   3.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   10.0 
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    21   10.0 

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 505 VLNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 612
           VL   Q +A K A  +   N   II+EPT     YG
Sbjct: 348 VLRHVQAEAEKHAAMLYQYNFNIIISEPTERISPYG 383


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -1

Query: 678 RRSTAAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQ 559
           ++STA  VKD Y  + +   V   + RS    ++D E ++
Sbjct: 53  KKSTAHFVKDIYEKYKNEPMVGLYATRSPFLLLNDPELIK 92


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -1

Query: 726 RWIHLEDTILDGKDGTRRSTAAEVKDKYISFSST 625
           RW   +DT+  G   +   TA      Y +FSS+
Sbjct: 45  RWKQYQDTLYSGTRSSESLTAQAHHRLYPAFSSS 78


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 726 RWIHLEDTILDGKDGTRRSTAAEV 655
           R+IH++D +  G+  TRR   A +
Sbjct: 123 RYIHIKDPLRYGRWVTRRIAVAGI 146


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
          finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 66 PFCIFNQSCYLFLKQ 22
          P+C  N SCY  LK+
Sbjct: 9  PYCRRNFSCYYSLKR 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,507
Number of Sequences: 438
Number of extensions: 5803
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)