Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0388.Seq
         (598 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1239 - 27275110-27275445                                         28   4.9  
04_01_0003 + 79564-79698,79879-79956,81025-81388,82399-82437,825...    28   6.5  
03_02_0797 - 11296426-11297258,11297745-11297901                       28   6.5  

>12_02_1239 - 27275110-27275445
          Length = 111

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -2

Query: 567 AALKPPGYPWRTRPSAA 517
           A  KPP  PWR  PSAA
Sbjct: 19  AVQKPPAKPWRASPSAA 35


>04_01_0003 +
           79564-79698,79879-79956,81025-81388,82399-82437,
           82561-82601,83258-83362,83914-83919,84044-84123,
           86744-86913,87664-87748,88067-88125,88451-88464
          Length = 391

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 130 LLPIRAMRLFSCARCRAIALRSRHIPFLFN 41
           L+ I A+RLFSC     I + S  I F+FN
Sbjct: 112 LVSIIALRLFSCLSALLIQVNSLLIVFIFN 141


>03_02_0797 - 11296426-11297258,11297745-11297901
          Length = 329

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = +3

Query: 531 WSSMGTPGALEPPT--APEATCWP 596
           W   G+ G  E P   AP+A+CWP
Sbjct: 174 WQHGGSDGLYESPELPAPDASCWP 197


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,835,345
Number of Sequences: 37544
Number of extensions: 219912
Number of successful extensions: 783
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)