Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0381.Seq
         (774 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1772 + 29411874-29413218,29413355-29413421,29413749-294138...    32   0.58 
09_06_0365 - 22582467-22583524,22584407-22584641,22585474-225856...    29   5.4  
10_08_0612 - 19228262-19228570,19229955-19230404                       28   7.2  
11_06_0259 - 21757190-21758467                                         28   9.5  

>07_03_1772 +
           29411874-29413218,29413355-29413421,29413749-29413896,
           29415293-29415416,29416340-29416590,29416923-29418449,
           29418786-29418896,29419576-29419734,29419827-29421734
          Length = 1879

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = +1

Query: 349 QKQVAICNYVCN*VVFLSIDNIGKHS*LHITQTIKTSSSSACISPLLDVNLSHIRHNERS 528
           +K V   N+    VV   +D + +H+ +  TQ  +  SSS+  SPLL + +++       
Sbjct: 500 EKPVTTRNHAYAEVVVFVLDQMTRHTQVTSTQRKQARSSSSSASPLLSLRITYYLFMVMG 559

Query: 529 STFRIPFFQAYW 564
           +T    F+   W
Sbjct: 560 ATAFEVFYDGSW 571


>09_06_0365 -
           22582467-22583524,22584407-22584641,22585474-22585684,
           22585775-22585848,22585943-22586092
          Length = 575

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 468 SLYLSTAGCKPLPYPPQ*TILYLSHPI 548
           S  L   GC+ LP PP   I +L+H I
Sbjct: 88  SCLLKAIGCRELPIPPHMDIYHLTHEI 114


>10_08_0612 - 19228262-19228570,19229955-19230404
          Length = 252

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 498 PLPYPPQ*TILYLSHPIFPGILATSHQP 581
           P P PP    +Y SH +   +LA SH P
Sbjct: 29  PRPIPPPRLRVYTSHRLLSSLLAPSHVP 56


>11_06_0259 - 21757190-21758467
          Length = 425

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 711 NWHYNNXXKWLPIPNHPK 658
           NW   +  +WLP+P HP+
Sbjct: 151 NWMRRHDPQWLPVPYHPQ 168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,671,276
Number of Sequences: 37544
Number of extensions: 381737
Number of successful extensions: 767
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)