Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0376.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    25   0.45 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.3  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   9.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.7  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
 Frame = +1

Query: 193 KRIENSI-ALRSTTGACLGPGEQSPSN-GVSTASSQQPTPVPHQPGKVRQMFEERRTKAG 366
           K IE+ + A+   T + L PG +SPS+  +S+ SS +       PG +     +R     
Sbjct: 43  KNIESHLNAISQITNSTLDPGRKSPSSPRISSPSSTK----SGSPGFLTYTKADRDVDLF 98

Query: 367 IDKSYPLQPIH----NTERTNRKTLPNGYAKVS 453
              S P  P H     T + N     NG  K S
Sbjct: 99  RGSSTPESPEHYYNQKTLQANNNDASNGNLKFS 131


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 229 TGACLGPGEQSPSNGVSTASSQQPTPVPH 315
           TG    P ++ P+  V   +SQQP  VP+
Sbjct: 7   TGNAGAPPQEMPTWFVRWLNSQQPRNVPN 35


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +2

Query: 299 RRLYLISQERFVKCSKRDAQKQALTRATRYSRYTTPKERTGRH 427
           +++  I  ++F    K+   +  +TRA+  S  T P ERT R+
Sbjct: 520 QKIMFIELDKFTVNLKQG--QNTITRASSQSSVTIPFERTFRN 560


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -1

Query: 518 ADCLCVFCDRFSTMTLVLVVEFETFAYPFGNVFRFVLSVL 399
           A C  +   R + +  +L  E +T A+P  N F  +L ++
Sbjct: 175 ATCAHLILQRVNHVKKILEKETQTVAFPKDNHFLALLDIV 214


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 598 DISAVKTFRFHKATAKIGTDKDE 666
           DIS   T+ F K   +  TD+DE
Sbjct: 10  DISENSTYLFDKHEDRNNTDRDE 32


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 12  F*CFFIVNLLYN 47
           F CF+++ LLYN
Sbjct: 367 FNCFWVMKLLYN 378


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 382 PLQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKR 492
           P+QP       N+  +     +VS++  S + I+EKR
Sbjct: 9   PVQPNAIPTTNNQIEMAAATKRVSDNRRSNKPIMEKR 45


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 277 STASSQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPI 396
           S++S+Q+ T        V Q   + R    +  +YP QP+
Sbjct: 314 SSSSNQEKTTTESAKISVIQDDAQMRLNKHVTTTYPKQPL 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,431
Number of Sequences: 336
Number of extensions: 3031
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)