Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0375.Seq
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0920 - 21580057-21580926                                         28   7.1  
12_02_1032 + 25542420-25542573,25543511-25543577,25543816-255439...    27   9.4  
03_05_0793 + 27755704-27756386,27756473-27757274,27757379-277576...    27   9.4  
03_01_0504 - 3792170-3792565                                           27   9.4  

>10_08_0920 - 21580057-21580926
          Length = 289

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 137 AGSATPPKLSVAASFKSAVTISP-TRPSSSLA 45
           A SA+P  +  AA+  +A T SP + PSSSL+
Sbjct: 161 AASASPKDVQAAAALAAAFTTSPSSSPSSSLS 192


>12_02_1032 +
           25542420-25542573,25543511-25543577,25543816-25543918,
           25544435-25544505,25544639-25544702,25545260-25545316,
           25545435-25545593,25545967-25546035,25546111-25546202,
           25546579-25546657,25546923-25547088,25547480-25547604,
           25547737-25548078,25548271-25548432,25548520-25548624,
           25548766-25548860,25548948-25549044,25549848-25550165,
           25550228-25550296
          Length = 797

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 368 KTAVDVKRRVEKKSIQRNPRRSIGNGTKKPCPRC 469
           K  + +K R+ K SI R+P RSI   + K    C
Sbjct: 482 KVLIHMKERLAKSSIIRSPYRSISRTSDKVACHC 515


>03_05_0793 +
           27755704-27756386,27756473-27757274,27757379-27757634,
           27758355-27758566,27760494-27760709
          Length = 722

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = -3

Query: 191 WLPVFEITLAKGIISLRIAGSATPPKLSVAASFKSAVTISPTRPSSSLAKFLLGAFF 21
           +L + E+ L + I      G A   K      FK+A T +      +L  F L AFF
Sbjct: 363 YLLLAEVNLQRAIEMAGQEGHAMKDKFDRGIGFKAAATAAHHPDRDALVNFYLSAFF 419


>03_01_0504 - 3792170-3792565
          Length = 131

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 209 ACVVSIWLPVFEITLAKGIISLRIAGSAT 123
           ACV S   P + +T + GI SL++AG A+
Sbjct: 99  ACVASSVRPSWFLTASPGIASLQVAGRAS 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,181,496
Number of Sequences: 37544
Number of extensions: 265848
Number of successful extensions: 759
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)