Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0373.Seq
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13070-9|AAU05578.1|  388|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U13070-8|AAN84828.1|  433|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AB079783-1|BAB84821.1|  433|Caenorhabditis elegans endo-beta-N-a...    30   2.2  
AC024772-1|AAF60536.2|  242|Caenorhabditis elegans Hypothetical ...    29   5.0  
Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical p...    28   6.6  
U80842-11|AAB37941.2|  231|Caenorhabditis elegans Hypothetical p...    28   8.8  
U41271-4|AAA82445.3|  262|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>U13070-9|AAU05578.1|  388|Caenorhabditis elegans Hypothetical
           protein F01F1.10c protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 519 FCWLIKRNTFYRISILTTQPRMMSESCH 436
           FC  + +N  YR+S +  QP+++S  CH
Sbjct: 272 FCTGMDQNWHYRLSTVQLQPQILSSFCH 299


>U13070-8|AAN84828.1|  433|Caenorhabditis elegans Hypothetical
           protein F01F1.10b protein.
          Length = 433

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 519 FCWLIKRNTFYRISILTTQPRMMSESCH 436
           FC  + +N  YR+S +  QP+++S  CH
Sbjct: 317 FCTGMDQNWHYRLSTVQLQPQILSSFCH 344


>AB079783-1|BAB84821.1|  433|Caenorhabditis elegans
           endo-beta-N-acetylglucosaminidase protein.
          Length = 433

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 519 FCWLIKRNTFYRISILTTQPRMMSESCH 436
           FC  + +N  YR+S +  QP+++S  CH
Sbjct: 317 FCTGMDQNWHYRLSTVQLQPQILSSFCH 344


>AC024772-1|AAF60536.2|  242|Caenorhabditis elegans Hypothetical
           protein Y40C5A.1 protein.
          Length = 242

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 122 IKFYHHRYHRSRSTYLSQ 69
           + FYH+ YHRS+  YL++
Sbjct: 31  VSFYHNNYHRSKILYLNK 48


>Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical protein
            ZC376.6 protein.
          Length = 1152

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 200  SFVNTIYTIGNKEPCSQYDSKALSSAITKFSAKFCNELDKKK 325
            +F + +  I N+    +   KA++SAI   +  +C ELD+K+
Sbjct: 888  NFFSKMVRIENRLKTMEIQHKAMASAIAHKNTLYCLELDRKE 929


>Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical
           protein R06F6.8a protein.
          Length = 1468

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 724 LESAGPPNFRVNGVLGFWGPN 786
           L ++  PNF  N +LG W PN
Sbjct: 231 LLTSNDPNFAPNAILGVWAPN 251


>Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical
           protein R06F6.8b protein.
          Length = 1470

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 724 LESAGPPNFRVNGVLGFWGPN 786
           L ++  PNF  N +LG W PN
Sbjct: 231 LLTSNDPNFAPNAILGVWAPN 251


>U80842-11|AAB37941.2|  231|Caenorhabditis elegans Hypothetical
           protein ZC239.4 protein.
          Length = 231

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -2

Query: 498 NTFYRISILTTQPRMMSESCHHPGYLGLSIALRVQDQ*FPKLSTPDKYSA 349
           N   R+ IL    + +   C+    + L + +  +D  FP +S PD ++A
Sbjct: 110 NVAKRLPILENNSQFLQVLCNQEKPILLIVVMASRDHFFPNMSIPDGFNA 159


>U41271-4|AAA82445.3|  262|Caenorhabditis elegans Hypothetical
           protein C46H3.3 protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
 Frame = -3

Query: 158 MIHQLFSLQLRKIKF-YHHRYHRSRSTYL---SQQIIILSMIV 42
           M+ +LFS  LRKI F Y    H + + +L   S Q+ ILSM++
Sbjct: 145 MLERLFSCGLRKINFQYMDHLHTASAFHLAAGSGQVQILSMLL 187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,259,825
Number of Sequences: 27780
Number of extensions: 384899
Number of successful extensions: 860
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)