Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0373.Seq
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   2.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   2.4  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   2.4  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 19/52 (36%), Positives = 23/52 (44%)
 Frame = +1

Query: 625 GGRSRPGPQ*NPNGGLKN*TPELKPPLKRSSLGLESAGPPNFRVNGVLGFWG 780
           G R   G +   N  LK   PE KPP  +  + LE + PP    N  LG  G
Sbjct: 47  GHREGLGRRHRYNFQLKPYNPEHKPPGPKDLVYLEPS-PPFCEKNPKLGILG 97


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +2

Query: 209 NTIYTIGNKEP---CSQYDSKALSSAITKFSAKFCNELDKKKN 328
           NT+Y + +       S+YD+K  +  IT F   F     KKK+
Sbjct: 358 NTMYVLSDNFQQLLFSKYDAKKRNFFITMFDLDFLTNACKKKD 400


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 19/52 (36%), Positives = 23/52 (44%)
 Frame = +1

Query: 625 GGRSRPGPQ*NPNGGLKN*TPELKPPLKRSSLGLESAGPPNFRVNGVLGFWG 780
           G R   G +   N  LK   PE KPP  +  + LE + PP    N  LG  G
Sbjct: 48  GHREGLGRRHRYNFQLKPYNPEHKPPGPKDLVYLEPS-PPFCEKNPKLGILG 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,496
Number of Sequences: 438
Number of extensions: 4730
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)