Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0369.Seq
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-4|CAB00062.1|  360|Caenorhabditis elegans Hypothetical pr...   142   3e-34
U41543-2|AAO21426.1|  359|Caenorhabditis elegans Hypothetical pr...   135   3e-32
U41543-1|AAB37022.2|  396|Caenorhabditis elegans Hypothetical pr...   135   3e-32
AF043703-6|AAK21503.1|  399|Caenorhabditis elegans Hypothetical ...   128   6e-30
AF003148-10|AAB54206.2|  427|Caenorhabditis elegans Hypothetical...   128   6e-30
Z83109-2|CAB05517.1|  372|Caenorhabditis elegans Hypothetical pr...   124   5e-29
AF106575-6|AAC78175.2|  244|Caenorhabditis elegans Hypothetical ...    60   2e-09
AC084159-16|AAK39357.1|  205|Caenorhabditis elegans Hypothetical...    30   1.6  
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AL032644-1|CAA21666.2|  604|Caenorhabditis elegans Hypothetical ...    29   4.8  
U58757-1|AAD47117.2|  620|Caenorhabditis elegans Dicer related h...    28   6.3  

>Z75714-4|CAB00062.1|  360|Caenorhabditis elegans Hypothetical
           protein ZC434.8 protein.
          Length = 360

 Score =  142 bits (343), Expect = 3e-34
 Identities = 66/125 (52%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
 Frame = +1

Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGD--VDTLGNLDPAGEFVVSTRVRCGRS 429
           ESY++FA+LF+P+IE+YHNGFK TD  P  + G+  V  L +LDP G+F+VSTR+RCGRS
Sbjct: 74  ESYTLFADLFNPVIEEYHNGFKATDTQPAMDLGEKNVGELADLDPEGKFIVSTRIRCGRS 133

Query: 430 LEGYPFNPCLTESQYKEMEDKVSGTL-XXXXXXXXXXXTPSPACSKETQQQLIDDHFLFK 606
           L+GYPFNPCL+E+ YK ME ++                 P     +ET+++LI DHFLFK
Sbjct: 134 LQGYPFNPCLSETNYKMMETRMKEIFNSITDPELKGTYYPLTGMDEETKKKLIADHFLFK 193

Query: 607 EGDRF 621
           EGDRF
Sbjct: 194 EGDRF 198



 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 41/65 (63%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
 Frame = +2

Query: 65  EKLEAGFSKLQG-SDSKSLLKKYXTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGI 241
           + +E  ++KLQG SD  SLLKK+ T++V    K+KKT  G+TLLD IQSG ENLDSGVGI
Sbjct: 9   KSIEEVYTKLQGASDCSSLLKKHLTKDVVAKNKSKKTRLGATLLDVIQSGGENLDSGVGI 68

Query: 242 YAPDA 256
           YAPDA
Sbjct: 69  YAPDA 73



 Score = 35.1 bits (77), Expect = 0.055
 Identities = 24/47 (51%), Positives = 27/47 (57%)
 Frame = +2

Query: 620 FLQAANACRFWPTGRGILPTNENKNVPRVVQTKEEQPSGIQSSMQIG 760
           FL+AANA R+WP GRGI   NE K    +V   EE    I  SMQ G
Sbjct: 198 FLKAANANRYWPNGRGIF-HNEKKTF--LVWVNEEDHLRI-ISMQNG 240


>U41543-2|AAO21426.1|  359|Caenorhabditis elegans Hypothetical
           protein F46H5.3b protein.
          Length = 359

 Score =  135 bits (327), Expect = 3e-32
 Identities = 66/125 (52%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
 Frame = +1

Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRS 429
           E+Y++F  LFDP+I+DYHNGF    K P  + G+  T  L +LDP G+F+ STR+RCGRS
Sbjct: 74  EAYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRS 133

Query: 430 LEGYPFNPCLTESQYKEMEDKVSGTL-XXXXXXXXXXXTPSPACSKETQQQLIDDHFLFK 606
           L+GYPFNPCL+E+ Y EME KV                 P    +KE Q QLI DHFLFK
Sbjct: 134 LQGYPFNPCLSEANYLEMESKVKAIFDNITDPELAGKYFPLDGMTKEIQDQLIKDHFLFK 193

Query: 607 EGDRF 621
           EGDRF
Sbjct: 194 EGDRF 198



 Score = 88.6 bits (210), Expect = 4e-18
 Identities = 43/71 (60%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = +2

Query: 47  VDAATLEKLEAGFSKLQGS-DSKSLLKKYXTREVFDSLKNKKTSFGSTLLDCIQSGVENL 223
           V    + K+E G++KLQ + +  SLLKKY T+EV D LK+KKT  G+ LLD IQSGV NL
Sbjct: 3   VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANL 62

Query: 224 DSGVGIYAPDA 256
           DSGVG+YAPDA
Sbjct: 63  DSGVGVYAPDA 73



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = +2

Query: 620 FLQAANACRFWPTGRGILPTNE 685
           FLQAANACR+WP GRGI   N+
Sbjct: 198 FLQAANACRYWPKGRGIFHNNQ 219


>U41543-1|AAB37022.2|  396|Caenorhabditis elegans Hypothetical
           protein F46H5.3a protein.
          Length = 396

 Score =  135 bits (327), Expect = 3e-32
 Identities = 66/125 (52%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
 Frame = +1

Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRS 429
           E+Y++F  LFDP+I+DYHNGF    K P  + G+  T  L +LDP G+F+ STR+RCGRS
Sbjct: 111 EAYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRS 170

Query: 430 LEGYPFNPCLTESQYKEMEDKVSGTL-XXXXXXXXXXXTPSPACSKETQQQLIDDHFLFK 606
           L+GYPFNPCL+E+ Y EME KV                 P    +KE Q QLI DHFLFK
Sbjct: 171 LQGYPFNPCLSEANYLEMESKVKAIFDNITDPELAGKYFPLDGMTKEIQDQLIKDHFLFK 230

Query: 607 EGDRF 621
           EGDRF
Sbjct: 231 EGDRF 235



 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 45/81 (55%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
 Frame = +2

Query: 17  CSSARKAATMVDAATLEKLEAGFSKLQGS-DSKSLLKKYXTREVFDSLKNKKTSFGSTLL 193
           C  A++  + V    + K+E G++KLQ + +  SLLKKY T+EV D LK+KKT  G+ LL
Sbjct: 31  CVQAQEGMS-VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLL 89

Query: 194 DCIQSGVENLDSGVGIYAPDA 256
           D IQSGV NLDSGVG+YAPDA
Sbjct: 90  DVIQSGVANLDSGVGVYAPDA 110



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = +2

Query: 620 FLQAANACRFWPTGRGILPTNE 685
           FLQAANACR+WP GRGI   N+
Sbjct: 235 FLQAANACRYWPKGRGIFHNNQ 256


>AF043703-6|AAK21503.1|  399|Caenorhabditis elegans Hypothetical
           protein W10C8.5 protein.
          Length = 399

 Score =  128 bits (308), Expect = 6e-30
 Identities = 65/124 (52%), Positives = 78/124 (62%), Gaps = 3/124 (2%)
 Frame = +1

Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRS 429
           E+Y++FA LFD IIEDYH GF    K PP + G+  T     LDP G+++ STR+RCGRS
Sbjct: 114 EAYTLFAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRS 172

Query: 430 LEGYPFNPCLTESQYKEMEDKVSGTL-XXXXXXXXXXXTPSPACSKETQQQLIDDHFLFK 606
           L+GYPFNPCLT+  Y EME KV                 P     K+TQ+QLI DHFLFK
Sbjct: 173 LKGYPFNPCLTQDNYLEMEGKVKKAFSEYSDKELKGKYYPLDGMGKDTQKQLIADHFLFK 232

Query: 607 EGDR 618
           EGDR
Sbjct: 233 EGDR 236



 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 43/78 (55%), Positives = 60/78 (76%), Gaps = 3/78 (3%)
 Frame = +2

Query: 32  KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYXTREVFDSLKNKKTSFGSTLLDCI 202
           +A + VDAAT++K+E  ++KL G +    KSLLKK+ T++V + LK K+T  G+TL DCI
Sbjct: 36  QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKDVVEKLKTKRTKLGATLYDCI 95

Query: 203 QSGVENLDSGVGIYAPDA 256
           +SGV NLD+GVG+YAPDA
Sbjct: 96  RSGVYNLDAGVGVYAPDA 113



 Score = 36.3 bits (80), Expect = 0.024
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +2

Query: 623 LQAANACRFWPTGRGILPTNE 685
           LQ ANAC FWP GRGI   N+
Sbjct: 238 LQYANACNFWPKGRGIFHNND 258


>AF003148-10|AAB54206.2|  427|Caenorhabditis elegans Hypothetical
           protein F32B5.1 protein.
          Length = 427

 Score =  128 bits (308), Expect = 6e-30
 Identities = 65/124 (52%), Positives = 78/124 (62%), Gaps = 3/124 (2%)
 Frame = +1

Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRS 429
           E+Y++FA LFD IIEDYH GF    K PP + G+  T     LDP G+++ STR+RCGRS
Sbjct: 142 EAYTLFAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRS 200

Query: 430 LEGYPFNPCLTESQYKEMEDKVSGTL-XXXXXXXXXXXTPSPACSKETQQQLIDDHFLFK 606
           L+GYPFNPCLT+  Y EME KV                 P     K+TQ+QLI DHFLFK
Sbjct: 201 LKGYPFNPCLTQDNYLEMEGKVKKAFSEYSDKELKGKYYPLDGMGKDTQKQLIADHFLFK 260

Query: 607 EGDR 618
           EGDR
Sbjct: 261 EGDR 264



 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 44/78 (56%), Positives = 60/78 (76%), Gaps = 3/78 (3%)
 Frame = +2

Query: 32  KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYXTREVFDSLKNKKTSFGSTLLDCI 202
           +A + VDAAT++K+E  ++KL G +    KSLLKK+ T+EV + LK K+T  G+TL DCI
Sbjct: 64  QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKEVVEKLKTKRTKVGATLYDCI 123

Query: 203 QSGVENLDSGVGIYAPDA 256
           +SGV NLD+GVG+YAPDA
Sbjct: 124 RSGVYNLDAGVGVYAPDA 141



 Score = 36.3 bits (80), Expect = 0.024
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +2

Query: 623 LQAANACRFWPTGRGILPTNE 685
           LQ ANAC FWP GRGI   N+
Sbjct: 266 LQYANACNFWPKGRGIFHNND 286


>Z83109-2|CAB05517.1|  372|Caenorhabditis elegans Hypothetical
           protein F44G3.2 protein.
          Length = 372

 Score =  124 bits (300), Expect = 5e-29
 Identities = 65/124 (52%), Positives = 76/124 (61%), Gaps = 3/124 (2%)
 Frame = +1

Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRS 429
           E+Y++FA LFD IIEDYH G     K PP + G+  T     LDP G+++ STR+RCGRS
Sbjct: 87  EAYTLFAPLFDKIIEDYH-GLGPDQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRS 145

Query: 430 LEGYPFNPCLTESQYKEMEDKVSGTL-XXXXXXXXXXXTPSPACSKETQQQLIDDHFLFK 606
           L GY FNPCLTE  Y EME+KV                 P    SK+TQ QLI DHFLFK
Sbjct: 146 LNGYQFNPCLTEDNYLEMEEKVKKAFSEFSDEELKGTYYPLDGMSKDTQNQLIADHFLFK 205

Query: 607 EGDR 618
           EGDR
Sbjct: 206 EGDR 209



 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = +2

Query: 47  VDAATLEKLEAGFSKLQGSDS---KSLLKKYXTREVFDSLKNKKTSFGSTLLDCIQSGVE 217
           VD  T++K+E  +  L G D     SLLKK  T++V + LK K T  G+ L DCI+SGV 
Sbjct: 14  VDPVTIKKIEEAYVMLNGPDGAKCSSLLKKNLTKDVIEKLKTKSTKLGANLYDCIRSGVY 73

Query: 218 NLDSGVGIYAPDA 256
            LD+ VG+YAPDA
Sbjct: 74  CLDALVGVYAPDA 86



 Score = 35.9 bits (79), Expect = 0.032
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +2

Query: 623 LQAANACRFWPTGRGILPTNE 685
           LQ ANAC FWP GRGI   N+
Sbjct: 211 LQYANACNFWPKGRGIFHNNK 231


>AF106575-6|AAC78175.2|  244|Caenorhabditis elegans Hypothetical
           protein K04F1.1 protein.
          Length = 244

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
 Frame = +2

Query: 32  KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYXTREVFDSLKNKKTSFGSTLLDCI 202
           +A + VDAAT++K+E  + KL G +    KSLL+KY T+++ + LK K T  G+++ DCI
Sbjct: 86  QAKSEVDAATIKKIEEAYVKLNGPEGAKCKSLLRKYLTKDIVEKLKTKCTKLGASVYDCI 145

Query: 203 QSGVENLDSGVGIYA 247
            +G+  +  G+   A
Sbjct: 146 LTGLRFVRQGLRFVA 160


>AC084159-16|AAK39357.1|  205|Caenorhabditis elegans Hypothetical
           protein Y73B3A.7 protein.
          Length = 205

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -3

Query: 461 VRQGLKGYPSSERPQRTRVETTNSPAGSRLP-SVSTSPQFLGGCLSV 324
           VR+ + GY    +  + ++++TN+P  SRLP +     Q LGG L +
Sbjct: 47  VRKSIMGYRGKRKTDQ-QLKSTNNPTSSRLPLNTKNVAQALGGRLHI 92


>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
           protein R07G3.3c protein.
          Length = 1316

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 20  SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYXTREVFDSLKNKKTSFGSTLLDC 199
           +SA +AA    +  + +L A  +  + S+++   K   T+  FDSLK +   F   + D 
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589

Query: 200 I 202
           +
Sbjct: 590 V 590


>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
           protein R07G3.3a protein.
          Length = 1982

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 20  SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYXTREVFDSLKNKKTSFGSTLLDC 199
           +SA +AA    +  + +L A  +  + S+++   K   T+  FDSLK +   F   + D 
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589

Query: 200 I 202
           +
Sbjct: 590 V 590


>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
           protein R07G3.3b protein.
          Length = 1987

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 20  SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYXTREVFDSLKNKKTSFGSTLLDC 199
           +SA +AA    +  + +L A  +  + S+++   K   T+  FDSLK +   F   + D 
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589

Query: 200 I 202
           +
Sbjct: 590 V 590


>AL032644-1|CAA21666.2|  604|Caenorhabditis elegans Hypothetical
           protein Y51H1A.2 protein.
          Length = 604

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
 Frame = +2

Query: 17  CSSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYXTREVF--DSLKNKKTSFGSTL 190
           CSS     +M+D+  +    A    L+GS S S+ +    +++    S     T   ST+
Sbjct: 277 CSSVYSHPSMLDSGEMSYQHAVLGGLKGSSSSSMRRVASNQKIQLPQSPLFSSTPVDSTI 336

Query: 191 LDCIQSGVEN--LD--SGVGIYAPDA 256
           LD ++ G  N  LD    V   APDA
Sbjct: 337 LDQVKIGKANSRLDFVQTVSDVAPDA 362


>U58757-1|AAD47117.2|  620|Caenorhabditis elegans Dicer related
           helicase protein 2 protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -3

Query: 542 VERALELALEADRVPETLSSISLYWDSVRQGLKGYPSSERPQRTR 408
           +++ LE  L  +R+     +++L WD+  + L G  S+E P   R
Sbjct: 225 LKKYLEKELGPERIRNFTDNMNLIWDNCHRELVGIGSAENPMIAR 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,819,636
Number of Sequences: 27780
Number of extensions: 306483
Number of successful extensions: 1040
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)