Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0369.Seq
         (766 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   205   3e-55
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   205   3e-55
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   4.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   7.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.5  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  205 bits (501), Expect = 3e-55
 Identities = 92/122 (75%), Positives = 103/122 (84%)
 Frame = +1

Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
           E+Y++FA+LFDPIIEDYH GFKKTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLE
Sbjct: 56  EAYTLFADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLE 115

Query: 436 GYPFNPCLTESQYKEMEDKVSGTLXXXXXXXXXXXTPSPACSKETQQQLIDDHFLFKEGD 615
           GYPFNPCLTE+QYKEME+KVS TL            P    SKETQQ+LIDDHFLFKEGD
Sbjct: 116 GYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGD 175

Query: 616 RF 621
           RF
Sbjct: 176 RF 177



 Score = 97.5 bits (232), Expect = 1e-22
 Identities = 45/55 (81%), Positives = 49/55 (89%)
 Frame = +2

Query: 92  LQGSDSKSLLKKYXTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDA 256
           L  SDSKSLLKKY +++VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDA
Sbjct: 1   LSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDA 55



 Score = 39.1 bits (87), Expect = 4e-05
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +2

Query: 620 FLQAANACRFWPTGRGI 670
           FLQAANA RFWPTGRGI
Sbjct: 177 FLQAANAXRFWPTGRGI 193


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  205 bits (501), Expect = 3e-55
 Identities = 92/122 (75%), Positives = 103/122 (84%)
 Frame = +1

Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
           E+Y++FA+LFDPIIEDYH GFKKTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLE
Sbjct: 72  EAYTLFADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLE 131

Query: 436 GYPFNPCLTESQYKEMEDKVSGTLXXXXXXXXXXXTPSPACSKETQQQLIDDHFLFKEGD 615
           GYPFNPCLTE+QYKEME+KVS TL            P    SKETQQ+LIDDHFLFKEGD
Sbjct: 132 GYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGD 191

Query: 616 RF 621
           RF
Sbjct: 192 RF 193



 Score =  121 bits (291), Expect = 8e-30
 Identities = 57/71 (80%), Positives = 62/71 (87%)
 Frame = +2

Query: 44  MVDAATLEKLEAGFSKLQGSDSKSLLKKYXTREVFDSLKNKKTSFGSTLLDCIQSGVENL 223
           MVD A L+KLE GFSKL  SDSKSLLKKY +++VFD LK KKTSF STLLDCIQSG+ENL
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENL 60

Query: 224 DSGVGIYAPDA 256
           DSGVGIYAPDA
Sbjct: 61  DSGVGIYAPDA 71



 Score = 44.8 bits (101), Expect = 9e-07
 Identities = 27/47 (57%), Positives = 31/47 (65%)
 Frame = +2

Query: 620 FLQAANACRFWPTGRGILPTNENKNVPRVVQTKEEQPSGIQSSMQIG 760
           FLQAANACRFWPTGRGI   N++K    +V   EE    I  SMQ+G
Sbjct: 193 FLQAANACRFWPTGRGIY-HNDDKTF--LVWCNEEDHLRI-ISMQMG 235


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 139 GSIRQPEEQKDLIRIHPP 192
           GS  QP+EQ+ L  + PP
Sbjct: 33  GSAEQPKEQEPLPPVTPP 50


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 21 QVPEKPQQWSTPQPSR 68
          Q P+ PQ+ S P PS+
Sbjct: 29 QSPQAPQRGSPPNPSQ 44


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 294 HRGLPQWLQEDRQAPAQEL 350
           H G   W QED  A  + L
Sbjct: 405 HHGSKSWTQEDMDAALEAL 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,688
Number of Sequences: 438
Number of extensions: 4300
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)