Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0366.Seq
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    26   0.37 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    24   1.1  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   3.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   6.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.9  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.9  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 397 VFALVAVPSYVWYAYTPLEH 338
           +F  ++V  YV YA++P++H
Sbjct: 139 IFTYLSVTCYVTYAWSPIDH 158


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 392 EYNILVMDLLGPSLEXLFNFCTRQFTIKTVLMLADQM 502
           +Y ++  DL    LE  F F ++  TIK    LA+ +
Sbjct: 158 KYRVVYTDLQRIELEKEFTFVSKYITIKRKSELAENL 194


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 404 LVMDLLGPSLEXLFNFCTRQFTIKTVLMLADQ 499
           LV   L P  + +  +C RQFT    L++ ++
Sbjct: 69  LVAGKLKPKRQFICKYCNRQFTKSYNLLIHER 100


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 257 FDVDSQIYITERSTTDLFRHL 195
           FDV S+IY  E    + +R++
Sbjct: 319 FDVSSEIYNVEYKNVEFWRNI 339


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = +1

Query: 379 RLRARIQYPGHGP-AGPLARGSLQLL 453
           R R    +PGHGP   P+    L+ L
Sbjct: 743 RSRQNSSFPGHGPTTAPMGSSILKRL 768


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 256 NWRGGGSES*IYKGPTP 306
           N R GGS+   YK P P
Sbjct: 306 NQRTGGSQILTYKNPKP 322


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 256 NWRGGGSES*IYKGPTP 306
           N R GGS+   YK P P
Sbjct: 307 NQRTGGSQILTYKNPKP 323


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 256 NWRGGGSES*IYKGPTP 306
           N R GGS+   YK P P
Sbjct: 307 NQRTGGSQILTYKNPKP 323


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 523 PLASASFXAXFXPDNFLM 576
           PL+S S+ + F P   LM
Sbjct: 21  PLSSVSYPSMFTPSQLLM 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,281
Number of Sequences: 336
Number of extensions: 3776
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)