Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0365.Seq
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.67 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.67 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    25   0.67 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   1.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.0  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    22   4.7  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   6.2  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 404 SPTQATELADPTEKIELYSTTLVPVAKATEAPAAPNYQ 517
           SPT AT +A  T  I+  S T+ P A          YQ
Sbjct: 252 SPTTATAIASATVTIQNVSNTIPPFASRGSMHFPNQYQ 289


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 404 SPTQATELADPTEKIELYSTTLVPVAKATEAPAAPNYQ 517
           SPT AT +A  T  I+  S T+ P A          YQ
Sbjct: 200 SPTTATAIASATVTIQNVSNTIPPFASRGSMHFPNQYQ 237


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 404 SPTQATELADPTEKIELYSTTLVPVAKATEAPAAPNYQ 517
           SPT AT +A  T  I+  S T+ P A          YQ
Sbjct: 383 SPTTATAIASATVTIQNVSNTIPPFASRGSMHFPNQYQ 420


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 401 FSPTQATELADPTEKIELYSTTLVPVAKATEAPAAPNY 514
           F+ + +  L  P+  I+LY+T+ V     + +   PNY
Sbjct: 29  FNISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNY 66


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 401 FSPTQATELADPTEKIELYSTTLVPVAKATEAPAAPNY 514
           F+ + +  L  P+  I+LY+T+ V     + +   PNY
Sbjct: 29  FNISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNY 66


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 690 PYXPHPKNIGKERGC 646
           P+ PHP N+    GC
Sbjct: 126 PFRPHPHNLVGREGC 140


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 709 PGNHLRPLXPPSEEHWE 659
           P  HLR   P   EHWE
Sbjct: 10  PLGHLRFKAPELPEHWE 26


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 331 CRYQLRTATRKRSLLPSATREPDLQPHSSDRTG 429
           C+Y  R  T+  +LL       D +P+S D  G
Sbjct: 82  CKYCNRQFTKSYNLLIHERTHTDERPYSCDICG 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,215
Number of Sequences: 336
Number of extensions: 4014
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)