Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0365.Seq
(767 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA... 32 0.99
BT028801-1|ABI34182.1| 286|Drosophila melanogaster LP21747p pro... 31 1.7
BT004476-1|AAO42640.1| 286|Drosophila melanogaster LP07342p pro... 31 1.7
AJ271041-1|CAB66004.1| 286|Drosophila melanogaster Gly-rich pro... 31 1.7
AE014297-4048|AAF56656.1| 286|Drosophila melanogaster CG5812-PA... 31 1.7
BT011451-1|AAR99109.1| 340|Drosophila melanogaster RE37955p pro... 31 2.3
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 31 2.3
AE014134-1758|AAN10718.1| 340|Drosophila melanogaster CG33302-P... 31 2.3
BT011108-1|AAR82775.1| 395|Drosophila melanogaster LD44162p pro... 30 3.0
AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid horm... 30 3.0
AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA... 30 3.0
AY060389-1|AAL25428.1| 199|Drosophila melanogaster LD29349p pro... 30 4.0
AE014296-2901|AAN11709.1| 809|Drosophila melanogaster CG3897-PC... 30 4.0
AE014296-2900|AAF49348.2| 769|Drosophila melanogaster CG3897-PA... 30 4.0
AE014296-2899|AAN11708.1| 976|Drosophila melanogaster CG3897-PD... 30 4.0
AE014296-2898|AAN11707.1| 976|Drosophila melanogaster CG3897-PB... 30 4.0
X01472-1|CAA25701.1| 439|Drosophila melanogaster protein ( Dros... 29 7.0
BT003771-1|AAO41450.1| 361|Drosophila melanogaster RE25317p pro... 29 9.3
BT003612-1|AAO39615.1| 521|Drosophila melanogaster GH15792p pro... 29 9.3
BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p pro... 29 9.3
BT003179-1|AAO24934.1| 137|Drosophila melanogaster RH63124p pro... 29 9.3
BT001571-1|AAN71326.1| 387|Drosophila melanogaster RE21586p pro... 29 9.3
AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p pro... 29 9.3
AE014297-1059|AAF54468.3| 521|Drosophila melanogaster CG33975-P... 29 9.3
AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC... 29 9.3
AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB... 29 9.3
AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA... 29 9.3
AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD... 29 9.3
AE013599-3157|AAF46695.3| 436|Drosophila melanogaster CG9480-PA... 29 9.3
>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
protein.
Length = 2112
Score = 31.9 bits (69), Expect = 0.99
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +2
Query: 266 PEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEK 445
PE Q P+T + P + T T PQ+ YPQ+P + T T
Sbjct: 1619 PEKPQKPTTTEY--PQKPTTTEEPTPEKPQKPTTTEYPQKPTTEEPTTTSIPGYNPTTTS 1676
Query: 446 IELY--STTLVPVAKATEAP 499
+ Y +TT +PV T P
Sbjct: 1677 VPGYNPTTTPIPVETTTSTP 1696
>BT028801-1|ABI34182.1| 286|Drosophila melanogaster LP21747p
protein.
Length = 286
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 69 MYAFVMMSCALLVQAYPYNPYYGNVDSLSYGSGDSNRGGL 188
M AF++MSC L A P Y N GSG + GGL
Sbjct: 1 MKAFILMSCLALAAARPEAGYNYNRPGGGGGSGGGSGGGL 40
>BT004476-1|AAO42640.1| 286|Drosophila melanogaster LP07342p
protein.
Length = 286
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 69 MYAFVMMSCALLVQAYPYNPYYGNVDSLSYGSGDSNRGGL 188
M AF++MSC L A P Y N GSG + GGL
Sbjct: 1 MKAFILMSCLALAAARPEAGYNYNRPGGGGGSGGGSGGGL 40
>AJ271041-1|CAB66004.1| 286|Drosophila melanogaster Gly-rich
protein protein.
Length = 286
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 69 MYAFVMMSCALLVQAYPYNPYYGNVDSLSYGSGDSNRGGL 188
M AF++MSC L A P Y N GSG + GGL
Sbjct: 1 MKAFILMSCLALAAARPEAGYNYNRPGGGGGSGGGSGGGL 40
>AE014297-4048|AAF56656.1| 286|Drosophila melanogaster CG5812-PA
protein.
Length = 286
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 69 MYAFVMMSCALLVQAYPYNPYYGNVDSLSYGSGDSNRGGL 188
M AF++MSC L A P Y N GSG + GGL
Sbjct: 1 MKAFILMSCLALAAARPEAGYNYNRPGGGGGSGGGSGGGL 40
>BT011451-1|AAR99109.1| 340|Drosophila melanogaster RE37955p
protein.
Length = 340
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 353 QQENEVYYPQQPENPIFSPTQATELADPTEKIELYSTTLVPVAKATEAPAAP 508
Q++ + YPQ + P +SP + A ++ ++ P A +T AAP
Sbjct: 280 QEQQQQTYPQDQQFPPYSPAGQSSPAPDSDDSDVVEARSAPEASSTTTTAAP 331
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 30.7 bits (66), Expect = 2.3
Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Frame = +1
Query: 112 RIPTIP--TMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWAVVWPRSVPPARSRTGA 285
R PT P T TP PT + V T + TTP P + PP R T
Sbjct: 463 RPPTYPPTTRRLTTPAPTYLPPTNKPLPPVTVRTTVRTTPR---PTLPPTKPPTRPPTTY 519
Query: 286 FNGPGVHT*SSPPDPCR 336
P V T PP P R
Sbjct: 520 LPPPTVRTTRPPPPPTR 536
Score = 30.7 bits (66), Expect = 2.3
Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Frame = +1
Query: 112 RIPTIP--TMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWAVVWPRSVPPARSRTGA 285
R PT P T TP PT + V T + TTP P + PP R T
Sbjct: 674 RPPTYPPTTRRLTTPAPTYLPPTNKPLPPVTVRTTVRTTPR---PTLPPTKPPTRPPTTY 730
Query: 286 FNGPGVHT*SSPPDPCR 336
P V T PP P R
Sbjct: 731 LPPPTVRTTRPPPPPTR 747
Score = 30.3 bits (65), Expect = 3.0
Identities = 23/73 (31%), Positives = 26/73 (35%)
Frame = +1
Query: 118 PTIPTMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWAVVWPRSVPPARSRTGAFNGP 297
P P TP PT + V T + TTP P + PP R T P
Sbjct: 575 PPPPPTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPR---PTLPPTKPPTRPPTTYLPPP 631
Query: 298 GVHT*SSPPDPCR 336
V T PP P R
Sbjct: 632 SVRTTRPPPPPTR 644
Score = 29.1 bits (62), Expect = 7.0
Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Frame = +1
Query: 112 RIPTIP--TMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWAVVWPRSVPPARSRTGA 285
R PT P T TP PT + V T + TTP P + PP + T
Sbjct: 777 RPPTYPPTTRRLTTPAPTYLPPTNKPLPPVTVRTTVRTTPR---PTLPPTRPPTKPPTTY 833
Query: 286 FNGPGVHT*SSPPDPCR 336
P V T PP P R
Sbjct: 834 LPPPTVRTTRPPPPPTR 850
Score = 28.7 bits (61), Expect = 9.3
Identities = 23/73 (31%), Positives = 26/73 (35%)
Frame = +1
Query: 118 PTIPTMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWAVVWPRSVPPARSRTGAFNGP 297
P P TP PT + V T + TTP P + PP R T P
Sbjct: 364 PPPPPTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTP---PPTKPPTRPPTTYLPPP 420
Query: 298 GVHT*SSPPDPCR 336
V T PP P R
Sbjct: 421 TVRTTRPPPPPTR 433
>AE014134-1758|AAN10718.1| 340|Drosophila melanogaster CG33302-PA
protein.
Length = 340
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 353 QQENEVYYPQQPENPIFSPTQATELADPTEKIELYSTTLVPVAKATEAPAAP 508
Q++ + YPQ + P +SP + A ++ ++ P A +T AAP
Sbjct: 280 QEQQQQTYPQDQQFPPYSPAGQSSPAPDSDDSDVVEARSAPEASSTTTTAAP 331
>BT011108-1|AAR82775.1| 395|Drosophila melanogaster LD44162p
protein.
Length = 395
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 159 GSGDSNRGGLVMSRYYNPYYNPRAVGGG---MAAFCTASPKP 275
G D++ G V+ ++ +P +P+A GGG MA TA P P
Sbjct: 129 GGADASATGGVVRKFSSPSSSPKAGGGGQGLMAGVPTARPSP 170
>AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP220 protein.
Length = 1475
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 159 GSGDSNRGGLVMSRYYNPYYNPRAVGGG---MAAFCTASPKP 275
G D++ G V+ ++ +P +P+A GGG MA TA P P
Sbjct: 814 GGADASATGGVVRKFSSPSSSPKAGGGGQGLMAGVPTARPSP 855
>AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA
protein.
Length = 1475
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 159 GSGDSNRGGLVMSRYYNPYYNPRAVGGG---MAAFCTASPKP 275
G D++ G V+ ++ +P +P+A GGG MA TA P P
Sbjct: 814 GGADASATGGVVRKFSSPSSSPKAGGGGQGLMAGVPTARPSP 855
>AY060389-1|AAL25428.1| 199|Drosophila melanogaster LD29349p
protein.
Length = 199
Score = 29.9 bits (64), Expect = 4.0
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 144 DSLSYGSGDSNRG-GLVMSRYYNPYYNPRAVGGGMAAFCTASPKPHRRLQRARCTYLIVA 320
+S++YG+G SN MSR NP G A P P ++R+ + + V
Sbjct: 113 ESITYGNGKSNNNYSSAMSR------NPLGRSTGCLAAPAQPPPPSVHVKRSASSVVNVN 166
Query: 321 ARPLPIPAT 347
+ LP PAT
Sbjct: 167 SHKLPPPAT 175
>AE014296-2901|AAN11709.1| 809|Drosophila melanogaster CG3897-PC,
isoform C protein.
Length = 809
Score = 29.9 bits (64), Expect = 4.0
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 144 DSLSYGSGDSNRG-GLVMSRYYNPYYNPRAVGGGMAAFCTASPKPHRRLQRARCTYLIVA 320
+S++YG+G SN MSR NP G A P P ++R+ + + V
Sbjct: 723 ESITYGNGKSNNNYSSAMSR------NPLGRSTGCLAAPAQPPPPSVHVKRSASSVVNVN 776
Query: 321 ARPLPIPAT 347
+ LP PAT
Sbjct: 777 SHKLPPPAT 785
>AE014296-2900|AAF49348.2| 769|Drosophila melanogaster CG3897-PA,
isoform A protein.
Length = 769
Score = 29.9 bits (64), Expect = 4.0
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 144 DSLSYGSGDSNRG-GLVMSRYYNPYYNPRAVGGGMAAFCTASPKPHRRLQRARCTYLIVA 320
+S++YG+G SN MSR NP G A P P ++R+ + + V
Sbjct: 683 ESITYGNGKSNNNYSSAMSR------NPLGRSTGCLAAPAQPPPPSVHVKRSASSVVNVN 736
Query: 321 ARPLPIPAT 347
+ LP PAT
Sbjct: 737 SHKLPPPAT 745
>AE014296-2899|AAN11708.1| 976|Drosophila melanogaster CG3897-PD,
isoform D protein.
Length = 976
Score = 29.9 bits (64), Expect = 4.0
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 144 DSLSYGSGDSNRG-GLVMSRYYNPYYNPRAVGGGMAAFCTASPKPHRRLQRARCTYLIVA 320
+S++YG+G SN MSR NP G A P P ++R+ + + V
Sbjct: 890 ESITYGNGKSNNNYSSAMSR------NPLGRSTGCLAAPAQPPPPSVHVKRSASSVVNVN 943
Query: 321 ARPLPIPAT 347
+ LP PAT
Sbjct: 944 SHKLPPPAT 952
>AE014296-2898|AAN11707.1| 976|Drosophila melanogaster CG3897-PB,
isoform B protein.
Length = 976
Score = 29.9 bits (64), Expect = 4.0
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 144 DSLSYGSGDSNRG-GLVMSRYYNPYYNPRAVGGGMAAFCTASPKPHRRLQRARCTYLIVA 320
+S++YG+G SN MSR NP G A P P ++R+ + + V
Sbjct: 890 ESITYGNGKSNNNYSSAMSR------NPLGRSTGCLAAPAQPPPPSVHVKRSASSVVNVN 943
Query: 321 ARPLPIPAT 347
+ LP PAT
Sbjct: 944 SHKLPPPAT 952
>X01472-1|CAA25701.1| 439|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 439
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 YRQPEAAQAPSTGQ-VYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQAT 421
Y+ P+ Q P T +Y + + P Q+N V+ P Q +N F P Q T
Sbjct: 241 YQAPQIYQTPPTNNPLYRHPIPYHPNPNNVFQPSQQNNVFQPSQ-QNNAFQPNQRT 295
>BT003771-1|AAO41450.1| 361|Drosophila melanogaster RE25317p
protein.
Length = 361
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 618 MTSHQPQSXHIRVLSQCSSDGGXKGRRWFPGXPEP 722
++S + QS H + +CSS G W G P P
Sbjct: 269 LSSMKLQSPHGSMADKCSSPGSSSSASWSSGSPSP 303
>BT003612-1|AAO39615.1| 521|Drosophila melanogaster GH15792p
protein.
Length = 521
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 618 MTSHQPQSXHIRVLSQCSSDGGXKGRRWFPGXPEP 722
++S + QS H + +CSS G W G P P
Sbjct: 49 LSSMKLQSPHGSMADKCSSPGSSSSASWSSGSPSP 83
>BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p
protein.
Length = 756
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 424
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 568 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 617
>BT003179-1|AAO24934.1| 137|Drosophila melanogaster RH63124p
protein.
Length = 137
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 618 MTSHQPQSXHIRVLSQCSSDGGXKGRRWFPGXPEP 722
++S + QS H + +CSS G W G P P
Sbjct: 49 LSSMKLQSPHGSMADKCSSPGSSSSASWSSGSPSP 83
>BT001571-1|AAN71326.1| 387|Drosophila melanogaster RE21586p
protein.
Length = 387
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 263 GGTERGHTTAHSSGVVVRIVVTAHDQASS 177
GGTE +TT S G+V + V T +D S
Sbjct: 343 GGTEYHYTTVTSEGIVKKAVKTVYDPVPS 371
>AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p
protein.
Length = 836
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 424
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 645 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 694
>AE014297-1059|AAF54468.3| 521|Drosophila melanogaster CG33975-PA
protein.
Length = 521
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 618 MTSHQPQSXHIRVLSQCSSDGGXKGRRWFPGXPEP 722
++S + QS H + +CSS G W G P P
Sbjct: 49 LSSMKLQSPHGSMADKCSSPGSSSSASWSSGSPSP 83
>AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC,
isoform C protein.
Length = 836
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 424
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 645 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 694
>AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB,
isoform B protein.
Length = 759
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 424
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 568 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 617
>AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA,
isoform A protein.
Length = 759
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 424
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 568 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 617
>AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD,
isoform D protein.
Length = 918
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 424
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 568 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 617
>AE013599-3157|AAF46695.3| 436|Drosophila melanogaster CG9480-PA,
isoform A protein.
Length = 436
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 263 GGTERGHTTAHSSGVVVRIVVTAHDQASS 177
GGTE +TT S G+V + V T +D S
Sbjct: 343 GGTEYHYTTVTSEGIVKKAVKTVYDPVPS 371
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,950,073
Number of Sequences: 53049
Number of extensions: 819303
Number of successful extensions: 3209
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3205
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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