Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0365.Seq
(767 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 2.6
At1g20270.1 68414.m02531 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 3.4
At5g16220.1 68418.m01895 octicosapeptide/Phox/Bem1p (PB1) domain... 29 4.5
At5g54390.1 68418.m06773 inositol monophosphatase family protein... 28 6.0
At3g57170.1 68416.m06365 N-acetylglucosaminyl transferase compon... 28 6.0
At3g12500.1 68416.m01556 basic endochitinase identical to basic ... 28 6.0
At4g26830.1 68417.m03863 glycosyl hydrolase family 17 protein si... 28 7.9
At3g51510.1 68416.m05641 expressed protein 28 7.9
>At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Rattus norvegicus [GI:474940], Mus
musculus [SP|Q60715], Homo sapiens [GI:18073925];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 267
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +3
Query: 276 HRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKR 419
H L + C YLI A+P +T ++KT T S RT S L R
Sbjct: 91 HNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLAR 138
>At1g20270.1 68414.m02531 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Gallus gallus [GI:212530], Rattus
norvegicus [GI:474940], Mus musculus [SP|Q60715];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 287
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 276 HRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKR 419
H L + C YLI A+P + +T + +T S RT S L+R
Sbjct: 89 HNFLSKEECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRR 136
>At5g16220.1 68418.m01895 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein hypothetical proteins -
Arabidopsis thaliana contains Pfam profile PF00564: PB1
domain
Length = 476
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 263 QPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPE-NPIF 403
Q + Q TGQ YI TL T+Y N VYY + P+ PI+
Sbjct: 326 QQQHIQVIYTGQPYITGNSPMTLPATAY--HHTNHVYYQRPPQPYPIY 371
>At5g54390.1 68418.m06773 inositol monophosphatase family protein
similar to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase
(EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam
profile PF00459: Inositol monophosphatase family;
supporting cDNA gi|1354509|gb|U55205.1|ATU55205
Length = 373
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 648 IRVLSQCSSDGGXKGRRW 701
++ +S+C+S GG KGR W
Sbjct: 124 LKAISRCNSVGGPKGRHW 141
>At3g57170.1 68416.m06365 N-acetylglucosaminyl transferase component
family protein / Gpi1 family protein similar to
SP|O14357 N-acetylglucosaminyl-phosphatidylinositol
biosynthetic protein gpi1 {Schizosaccharomyces pombe};
contains Pfam profile PF05024: N-acetylglucosaminyl
transferase component (Gpi1)
Length = 560
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 369 SITLSNQRTRSSAPLKRPNWLTPL 440
S++ SN ++ APLK+P W+ L
Sbjct: 49 SLSFSNSSPQTKAPLKKPKWVDDL 72
>At3g12500.1 68416.m01556 basic endochitinase identical to basic
endochitinase precursor SP:P19171 from [Arabidopsis
thaliana]
Length = 322
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 342 LVSARVWRRRSGMYTWPVEGACAASGWRYRTRPYHRPQLWGCSKDCSNGS*P 187
L SA R++G P C+ GW T PY + GC C+ G P
Sbjct: 17 LSSAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQP--GCQSQCTPGGTP 66
>At4g26830.1 68417.m03863 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 448
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 57 IMKVMYAFVMMSCA-LLVQAYPYNPYYGNVD--SLSYGSGDSNRGGL 188
++K M A + + + L+V AYP+ Y N D SL Y N G +
Sbjct: 179 VVKPMLALLQQTSSYLMVNAYPFFAYAANADKISLDYALFKENAGNI 225
>At3g51510.1 68416.m05641 expressed protein
Length = 181
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -1
Query: 314 DQVCTPGPLKAPV--RLRAGGTERGHTTAHSSGVVVRIVVTAHDQAS 180
D+ C P K+P G +GH + V R+VVTA + S
Sbjct: 18 DECCNRSPTKSPFPGHHPLAGRRKGHLLHYERSTVRRLVVTAATEGS 64
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,333,411
Number of Sequences: 28952
Number of extensions: 360491
Number of successful extensions: 1167
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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