Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0364.Seq
(777 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 33 0.25
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 33 0.25
01_06_0656 - 30926858-30927040,30927141-30927281,30927373-309274... 31 1.0
11_04_0192 - 14710848-14711165 31 1.3
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 31 1.3
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 31 1.3
09_06_0132 - 21042653-21042873,21042950-21043027,21043106-210431... 30 2.4
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 30 2.4
03_05_1120 - 30539817-30539990,30540266-30540727 30 2.4
09_06_0137 - 21080263-21081894 29 5.4
04_04_1602 + 34712748-34713097,34715452-34715605,34715702-34716103 29 5.4
08_01_0059 - 394001-394708 28 7.2
03_06_0621 - 35147070-35148359,35148499-35148579,35148665-351487... 28 7.2
03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009 28 7.2
01_06_1259 - 35810926-35811777 28 7.2
01_03_0075 - 12218501-12218611,12219028-12219267,12219698-122198... 28 7.2
08_02_0941 + 22829689-22830012,22830077-22830460 28 9.5
08_02_0109 - 12642682-12643494 28 9.5
07_03_1142 + 24287674-24288357,24291451-24292137 28 9.5
05_01_0445 + 3547176-3547577,3548625-3549557,3550246-3550524,355... 28 9.5
04_01_0301 + 4016588-4016627,4016715-4018837 28 9.5
02_02_0353 + 9276316-9276518,9276915-9277314 28 9.5
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQ--ANDKLDKSKKXLQAELEDT 109
L KD EA+ QI++L++ A+ LDK++K + +LEDT
Sbjct: 62 LKKDPEAILEQIEKLEKMKADGALDKARKHKKRQLEDT 99
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAE 97
L KD +AL RQ+D ++ ND L K LQAE
Sbjct: 187 LEKDYDALKRQLDAVKAENDALLNHNKKLQAE 218
>01_06_0656 -
30926858-30927040,30927141-30927281,30927373-30927489,
30927696-30927784,30927870-30928010,30928084-30928171,
30928280-30928342,30928544-30928699,30928778-30928870,
30929095-30929176,30929426-30929493,30929575-30930633
Length = 759
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 23 LHRQIDELQQANDKLDKSKKXLQAE 97
LH+ ID+L++A +K+ K K LQAE
Sbjct: 633 LHKSIDQLRKAANKIHKEKMMLQAE 657
>11_04_0192 - 14710848-14711165
Length = 105
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 551 SKRXPAGXKXVXRXGXNRSPXIXGSRLAANXGGXGTPLEEXXAXKQTRILPA 706
S+R G R G RS G+R + GG G P+EE A ++ P+
Sbjct: 39 SRRTSPGGGDNSRGGGRRSRGRGGARSGSGGGGDGGPIEEEAAERRRMRRPS 90
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 44 LQQANDKLDKSKKXLQAELEDTNIELEAQ 130
LQ AND L KS L+ ELEDT + A+
Sbjct: 931 LQLANDDLHKSIANLEKELEDTKVSSHAE 959
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 17 EALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXK 157
+AL +DE ++ D++++S L ELE+TN + A+ L K
Sbjct: 652 KALEADLDEATKSLDEMNRSALSLSKELEETNSRKDTLEAEKKMLSK 698
>09_06_0132 -
21042653-21042873,21042950-21043027,21043106-21043167,
21043504-21043578,21043664-21043752,21043825-21043905,
21044939-21045076,21046299-21046429,21046521-21046592,
21047218-21047275,21047362-21047461,21047544-21047617,
21047701-21047836,21047913-21048137,21048211-21048446,
21048949-21049081,21049195-21049484
Length = 732
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/38 (50%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 663 WKNXRRQNKPESCRL-LRPR-KAKESFPGPGPSKGTPE 770
WKN N ES RL + P A S PG GPS TPE
Sbjct: 437 WKNFNCYNFDESSRLPVNPSPSAVPSKPGLGPSSYTPE 474
>04_04_1509 -
34074206-34074398,34074506-34074777,34075411-34075608,
34076092-34076187,34076318-34076500,34076597-34076799,
34076887-34077013,34077098-34077292,34077400-34077540,
34077669-34077812,34077876-34078040,34078776-34078976,
34079049-34079195,34079275-34079427,34079731-34079833,
34079954-34080069,34080168-34080349,34080442-34080541,
34081200-34081527,34081605-34081834,34081979-34082110,
34082787-34082859,34083274-34083338
Length = 1248
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQR 133
LSK VE R+ D L + K K ++ +Q ELE L+++R
Sbjct: 597 LSKAVEESERKADLLNEELQKKTKQERDMQKELEGLRDTLQSER 640
>03_05_1120 - 30539817-30539990,30540266-30540727
Length = 211
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = +3
Query: 189 KSVPWRSGTPPREIRRSTRPXRGDQGALSDQGIR*CCREDRRARTDEASAPSGVGRAGQL 368
+++ WR P R R P D+ A + R E R R D A+ P GV A
Sbjct: 142 RALEWRPRPPRRRGARGKLP--ADKAATREDAERVPSAEVRN-RPDMATTPGGVADAVTA 198
Query: 369 AXHGRQERP 395
A QERP
Sbjct: 199 AARLNQERP 207
>09_06_0137 - 21080263-21081894
Length = 543
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 277 SERAPWSPLXGLVLRLISLG-GVPLRHGTLFGHHLIEAL 164
S +P PL GL+ RL++L GVPL F HH++ +L
Sbjct: 101 SPPSPQLPL-GLLRRLLALRRGVPLPEAVAFFHHVLPSL 138
>04_04_1602 + 34712748-34713097,34715452-34715605,34715702-34716103
Length = 301
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 7/37 (18%)
Frame = -2
Query: 266 TLVSSXWPRAPPDLSRRRT-------APPRHALRPPP 177
T++ P P DLSR R APP H ++PPP
Sbjct: 215 TVIQGPKPGKPTDLSRMRQILVKLKHAPPPHMMQPPP 251
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 245 PRAPPDLSRRRTAPPRHALRPPP 177
P PP RR PP +RPPP
Sbjct: 14 PATPPPPPRRAPPPPSPPIRPPP 36
>03_06_0621 -
35147070-35148359,35148499-35148579,35148665-35148741,
35148792-35149298,35149405-35150278
Length = 942
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 17 EALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRA 136
EA HR+IDE+ + K+K + ++++ I L+ RA
Sbjct: 837 EASHREIDEMASVAEMCLKTKGAKRPKMKEVEIRLQLLRA 876
>03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009
Length = 768
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 186 PKSVPWRSGTPPRE--IRRSTRPXRGDQGALSDQG 284
P+SV R G RE +R S RP RG++G D G
Sbjct: 277 PRSVHDRLGDHDREDELRGSRRPERGERGNRGDDG 311
>01_06_1259 - 35810926-35811777
Length = 283
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 281 LVRESTLVSSXWPRAPPDLSRRRTAPPRHALRPP 180
+ RE ++ + P PPD++ PR+A PP
Sbjct: 18 VAREPAVIINGVPDLPPDVASESQPEPRNAAEPP 51
>01_03_0075 -
12218501-12218611,12219028-12219267,12219698-12219815,
12219949-12220016,12220124-12220375,12221362-12221463,
12221734-12221802,12221892-12221987,12222161-12222208,
12222352-12222479,12222818-12222896,12223651-12223797,
12223956-12224022,12224655-12224830,12225588-12225755,
12225879-12225992,12226657-12226722,12227306-12227524,
12228142-12228321,12228481-12228584,12228998-12229277,
12230582-12231004
Length = 1084
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 274 LTRXLDDAAEKIEELERTKRVLQAEWDELANSQ 372
LTR LD+A K+E R E+DE+ NSQ
Sbjct: 840 LTRALDEAQRKVENYFFDIRKQLFEYDEVLNSQ 872
>08_02_0941 + 22829689-22830012,22830077-22830460
Length = 235
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 634 RERXGXXDAFGRXXGXKTNPNLAGFFAPGRQRKASQGRGLPRERRSK 774
R+R G G + AG PG++R++ RG R RRSK
Sbjct: 177 RDRVGGEGCRDDELGERYAMRYAGAEEPGQRRRSGGMRGRRRRRRSK 223
>08_02_0109 - 12642682-12643494
Length = 270
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 177 RWWPKSVPWRSGTPPREIRRSTRPXRGDQGALSDQ 281
RWW + WR P R RS GD G + ++
Sbjct: 164 RWWRQLPTWRKEEPGRGGARSGSGGGGDGGPIEEE 198
>07_03_1142 + 24287674-24288357,24291451-24292137
Length = 456
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 693 ESCRLLRPRKAKESFPGPGPSKGT 764
++ R RPR+ + + PGP P KG+
Sbjct: 215 QALRRSRPRRPRPNIPGPPPPKGS 238
>05_01_0445 +
3547176-3547577,3548625-3549557,3550246-3550524,
3550624-3550752,3550813-3550869
Length = 599
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 5 SKDVEALHRQIDELQQANDKLDKSKKXLQAELE 103
S + EA RQI+ ++ +DK D+ +K L+ +L+
Sbjct: 529 SDEFEAFQRQIELMRSLDDKDDRYRKILKEKLQ 561
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 274 LTRXLDDAAEKIEELERTKRVLQAEWDELANS 369
+ + L+D K EEL+ K ++QA+ DEL ++
Sbjct: 186 IMKELEDLKRKFEELQTNKDLVQAKNDELLSN 217
>02_02_0353 + 9276316-9276518,9276915-9277314
Length = 200
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 156 RNRRASIRWWPKSVPWRSGTPP 221
R+RR RW P S P RS PP
Sbjct: 161 RHRRRRRRWCPSSSPRRSPAPP 182
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,321,928
Number of Sequences: 37544
Number of extensions: 277286
Number of successful extensions: 1251
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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