Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0364.Seq
(777 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_42606| Best HMM Match : Ank (HMM E-Value=3.4e-08) 38 0.012
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 35 0.084
SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) 32 0.60
SB_47207| Best HMM Match : NUDE_C (HMM E-Value=0) 31 0.79
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 31 1.4
SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) 30 1.8
SB_12781| Best HMM Match : Spindle_assoc (HMM E-Value=0.12) 30 2.4
SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 29 3.2
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 29 4.2
SB_5507| Best HMM Match : TP2 (HMM E-Value=4) 29 5.5
SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17) 29 5.5
SB_25754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 28 7.3
SB_51279| Best HMM Match : Filament (HMM E-Value=0.092) 28 7.3
SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) 28 9.7
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 28 9.7
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 28 9.7
SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 28 9.7
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 14 VEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELE 124
++AL RQ+DE ++ + +L+ SK+ LQ EL+D E E
Sbjct: 1717 MKALKRQVDEAEEESSRLNSSKRKLQRELDDAQAENE 1753
Score = 34.7 bits (76), Expect = 0.084
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAEL 100
L +++EAL+ ++E+Q +N KL+K++K LQ E+
Sbjct: 1322 LVREMEALNTTVEEIQGSNAKLEKTRKRLQNEM 1354
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 5 SKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEA 127
SK +E L +++ ++ + L+KSKK L+ E IEL+A
Sbjct: 1127 SKQIEELTIELESTKKNKNSLEKSKKDLENETSSLTIELKA 1167
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQKSFD 175
L KD+E ++ L+ + L++SKK L+ L +T L+ + + + K K +
Sbjct: 1210 LQKDLEVQISMVESLESKHTALERSKKSLEDTLAETQDSLQEETHHKLMIISKLKDVE 1267
>SB_42606| Best HMM Match : Ank (HMM E-Value=3.4e-08)
Length = 551
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +2
Query: 5 SKDVEALHRQIDELQQANDKLDKSKKXLQ---AELEDTNIELEAQRAKXMXLXKKQKS 169
SKD + LHR++ E+Q ++++++ ++ E+E ELE + K + L +K+KS
Sbjct: 455 SKDEQDLHRKLQEIQATQGDMEEAQREIEKKKTEIEKIKAELEELQQKTVTLNRKRKS 512
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQKSFD 175
L+ ++ + ++ Q +K++ L +ELED I+LE + L KKQK D
Sbjct: 1429 LAAKLQEMEEALNTAQTKAASAEKTRSRLNSELEDALIDLEKAQTNNANLEKKQKKID 1486
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 292 DAAEKIEELERTKRVLQAEWDELANSQXTA 381
DA K+EELE KR L A+ E+ + TA
Sbjct: 1414 DALAKVEELEDAKRKLAAKLQEMEEALNTA 1443
>SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKK 160
L K VEA +I L+ D+L++ KK ++ ELE + +A RA L ++
Sbjct: 298 LEKTVEARESRIRTLECRVDELERQKKKIKEELECVSFNTQAARASKSQLLRE 350
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 38 DELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQKSFD 175
DEL + L K L E ED + LE ++ + L KKQ+ FD
Sbjct: 2114 DELHRQMAGLKKKSSRLAQEKEDMKLLLEEEQTRNTDLEKKQRKFD 2159
>SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069)
Length = 657
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 EETRVLSLTRX-LDDAAEKIE-ELERTKRVLQAEWDELANSQXTADKNVH 396
E+ +++ +T L+D EKI+ ELE TK ++QAE + A + + +H
Sbjct: 233 EKEKIVEMTTLQLEDEKEKIKNELEETKELMQAELESQAETYTEQTRKMH 282
>SB_47207| Best HMM Match : NUDE_C (HMM E-Value=0)
Length = 294
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 17 EALHRQIDELQQANDKLDKSKKXLQAELED 106
E L + + EL+QAND L+++K+ LED
Sbjct: 61 EELQKYVRELEQANDDLERAKRATVCSLED 90
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 17 EALHRQIDELQQANDKLDKSKKXLQAELEDTNIEL 121
EAL ++D+ + ND L KK L+AE+E+ +L
Sbjct: 686 EALKDELDKTEDENDALRDKKKELEAEIEELKRKL 720
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAK 139
L K+V +L Q+D L+ N+KL LQ +L+ +L K
Sbjct: 1186 LQKEVSSLKIQLDALKHENNKLQNELTLLQKKLQALQQQLANAEGK 1231
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 245 PRAPPDLSRRRTAPPRHALRPPPY 174
PR PP L R T PPR+ PP Y
Sbjct: 276 PRYPPSLIRYPTLPPRYPPSPPRY 299
>SB_11248| Best HMM Match : LMP (HMM E-Value=0.18)
Length = 442
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 11 DVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQR 133
++ L ++++ Q+ D+L+K + EL+DT LEA++
Sbjct: 94 EITRLEEELEKSQKGLDELNKQITDMTRELQDTQTRLEAEK 134
>SB_12781| Best HMM Match : Spindle_assoc (HMM E-Value=0.12)
Length = 200
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKK 160
L K VEA I L+ D+L + KK + ELE + +A RA L ++
Sbjct: 127 LQKTVEARESTIRTLECRVDELVRQKKKITEELECVSFNTQAARASKSQLLRE 179
>SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 756
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 29 RQIDELQQANDKLDKSKK-XLQAELEDTNIELEAQRAKXMXLXKKQK 166
RQ+D+L++ +++D SKK L +LED E + R + KK+K
Sbjct: 672 RQLDQLRKQLEQVDLSKKHELLKKLEDVEKEQKKLRKEEEDFHKKEK 718
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAK 139
L+KD EAL ++ Q +DK+ + ++ L+A+ ++ + L Q+ K
Sbjct: 541 LNKDNEALREKLSSSVQIHDKVAELEQALKAKTDELDQVLACQKGK 586
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 2 LSKDVEALHRQI----DELQQANDKLDKSKKXLQAELEDTNIELEAQR 133
L +D + LH+ DELQ + ++KK +LE+TNIE+ + R
Sbjct: 825 LKRDKDKLHKDYITIDDELQNVRSRYTRTKK----QLEETNIEINSLR 868
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 274 LTRXLDDAAEKIEELERTKRVLQAEWDELANSQ 372
L L +A EK+ ++E T LQAE D L NS+
Sbjct: 738 LQHNLVEAKEKLGKIEETCETLQAEKDMLRNSE 770
>SB_5507| Best HMM Match : TP2 (HMM E-Value=4)
Length = 524
Score = 28.7 bits (61), Expect = 5.5
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 33 RSTSCSRPTTN*TRVKRXFKPSWKTLT*N*KPSEPXLWXLXRNRRASIRWWPKS-VPWRS 209
R TS P T + + +W++ T +P+E R+S RWWP+ +RS
Sbjct: 227 RITSPEPPATRPHPDESKLEGAWQSGT---EPTERRKRRFVSPLRSSCRWWPRGRAGYRS 283
Query: 210 GTPPREIRRSTRPXRGDQGALSDQGIR 290
R RR + G +DQG R
Sbjct: 284 ARSGR--RRDSAHKATAGGHTADQGAR 308
>SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17)
Length = 1426
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 11 DVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQR 133
D + +++DELQ +LD+S + +EDT +LE Q+
Sbjct: 909 DKNEIQKEMDELQHRWTELDESLHWKEDRIEDTVRKLEIQQ 949
>SB_25754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 693 ESCRLLRPRKAKESFPGPGPSKGTPEQ 773
ES +L+PR+ K S G G S GTP +
Sbjct: 129 ESAEMLQPREHKMSILGLGSSTGTPPE 155
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 8 KDVEALHRQIDELQQANDKLDKSKKXLQAEL 100
KD+EA R ID+L+ D L K L+ EL
Sbjct: 1508 KDIEAKDRTIDDLRNERDGLVKENGDLKREL 1538
>SB_51279| Best HMM Match : Filament (HMM E-Value=0.092)
Length = 778
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXM 145
L++ E+L R +DE + + + L AE++DT +L Q A M
Sbjct: 316 LAEGYESLRRHMDEETKFHQEQTSQNAALMAEMQDTINQLRLQLADAM 363
>SB_48596| Best HMM Match : Filament (HMM E-Value=0.23)
Length = 458
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 271 SLTRXLDDAAEKIEELERTKRVLQAEWDELANSQXTADKN 390
SL + + D EK++ +E K L+ +DEL + D+N
Sbjct: 194 SLEKSVSDLREKVKLVENEKSELKFAFDELDSKYRVCDEN 233
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 23 LHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQKSFDK 178
L RQ+ + Q D + + L+ +L N ELE+ ++ L +K + K
Sbjct: 609 LERQLQQSHQKEDHMVEELNALKIQLNSANTELESTQSMNEKLKRKLRQLLK 660
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQKSFD 175
L + ++A RQID +Q D+L L+AEL + E + KK S +
Sbjct: 2012 LQRQMDAKIRQIDAKEQFIDELRSQNTGLEAELSNIKEEFTENKTGVETTEKKVVSLE 2069
>SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 714 PRKAKESFPGPGPSKGTPEQK 776
P ++FPG GP + TPEQ+
Sbjct: 606 PGSPGQTFPGNGPQQATPEQQ 626
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 14 VEALHRQIDELQQANDKLDKSKKXL--QAELEDTNIELEAQRAK 139
V +LH ++ E+ DKLD K L + E T+++ E ++A+
Sbjct: 1641 VNSLHEKMSEMNDEKDKLDDENKQLLDEKSREVTDLKGEVKKAQ 1684
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 5 SKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELE 124
+KD+E +++DE +A+ K K LQ+ +E+E
Sbjct: 598 TKDLEKTRKKLDEANEASKKAISEKSVLQSRHNTLLVEME 637
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,419,838
Number of Sequences: 59808
Number of extensions: 281625
Number of successful extensions: 1136
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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