BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesV0364.Seq (777 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009 SB_42606| Best HMM Match : Ank (HMM E-Value=3.4e-08) 38 0.012 SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 35 0.084 SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20 SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26 SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) 32 0.60 SB_47207| Best HMM Match : NUDE_C (HMM E-Value=0) 31 0.79 SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0 SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 31 1.4 SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) 30 1.8 SB_12781| Best HMM Match : Spindle_assoc (HMM E-Value=0.12) 30 2.4 SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4 SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 29 3.2 SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2 SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 29 4.2 SB_5507| Best HMM Match : TP2 (HMM E-Value=4) 29 5.5 SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17) 29 5.5 SB_25754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5 SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 28 7.3 SB_51279| Best HMM Match : Filament (HMM E-Value=0.092) 28 7.3 SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) 28 9.7 SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 28 9.7 SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 28 9.7 SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7 SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7 SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 28 9.7 >SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1805 Score = 37.9 bits (84), Expect = 0.009 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +2 Query: 14 VEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELE 124 ++AL RQ+DE ++ + +L+ SK+ LQ EL+D E E Sbjct: 1717 MKALKRQVDEAEEESSRLNSSKRKLQRELDDAQAENE 1753 Score = 34.7 bits (76), Expect = 0.084 Identities = 14/33 (42%), Positives = 26/33 (78%) Frame = +2 Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAEL 100 L +++EAL+ ++E+Q +N KL+K++K LQ E+ Sbjct: 1322 LVREMEALNTTVEEIQGSNAKLEKTRKRLQNEM 1354 Score = 32.3 bits (70), Expect = 0.45 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +2 Query: 5 SKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEA 127 SK +E L +++ ++ + L+KSKK L+ E IEL+A Sbjct: 1127 SKQIEELTIELESTKKNKNSLEKSKKDLENETSSLTIELKA 1167 Score = 31.5 bits (68), Expect = 0.79 Identities = 15/58 (25%), Positives = 29/58 (50%) Frame = +2 Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQKSFD 175 L KD+E ++ L+ + L++SKK L+ L +T L+ + + + K K + Sbjct: 1210 LQKDLEVQISMVESLESKHTALERSKKSLEDTLAETQDSLQEETHHKLMIISKLKDVE 1267 >SB_42606| Best HMM Match : Ank (HMM E-Value=3.4e-08) Length = 551 Score = 37.5 bits (83), Expect = 0.012 Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Frame = +2 Query: 5 SKDVEALHRQIDELQQANDKLDKSKKXLQ---AELEDTNIELEAQRAKXMXLXKKQKS 169 SKD + LHR++ E+Q ++++++ ++ E+E ELE + K + L +K+KS Sbjct: 455 SKDEQDLHRKLQEIQATQGDMEEAQREIEKKKTEIEKIKAELEELQQKTVTLNRKRKS 512 >SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) Length = 1997 Score = 34.7 bits (76), Expect = 0.084 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = +2 Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQKSFD 175 L+ ++ + ++ Q +K++ L +ELED I+LE + L KKQK D Sbjct: 1429 LAAKLQEMEEALNTAQTKAASAEKTRSRLNSELEDALIDLEKAQTNNANLEKKQKKID 1486 Score = 28.3 bits (60), Expect = 7.3 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +1 Query: 292 DAAEKIEELERTKRVLQAEWDELANSQXTA 381 DA K+EELE KR L A+ E+ + TA Sbjct: 1414 DALAKVEELEDAKRKLAAKLQEMEEALNTA 1443 >SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 662 Score = 33.5 bits (73), Expect = 0.20 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +2 Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKK 160 L K VEA +I L+ D+L++ KK ++ ELE + +A RA L ++ Sbjct: 298 LEKTVEARESRIRTLECRVDELERQKKKIKEELECVSFNTQAARASKSQLLRE 350 >SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2463 Score = 33.1 bits (72), Expect = 0.26 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +2 Query: 38 DELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQKSFD 175 DEL + L K L E ED + LE ++ + L KKQ+ FD Sbjct: 2114 DELHRQMAGLKKKSSRLAQEKEDMKLLLEEEQTRNTDLEKKQRKFD 2159 >SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) Length = 657 Score = 31.9 bits (69), Expect = 0.60 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = +1 Query: 253 EETRVLSLTRX-LDDAAEKIE-ELERTKRVLQAEWDELANSQXTADKNVH 396 E+ +++ +T L+D EKI+ ELE TK ++QAE + A + + +H Sbjct: 233 EKEKIVEMTTLQLEDEKEKIKNELEETKELMQAELESQAETYTEQTRKMH 282 >SB_47207| Best HMM Match : NUDE_C (HMM E-Value=0) Length = 294 Score = 31.5 bits (68), Expect = 0.79 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +2 Query: 17 EALHRQIDELQQANDKLDKSKKXLQAELED 106 E L + + EL+QAND L+++K+ LED Sbjct: 61 EELQKYVRELEQANDDLERAKRATVCSLED 90 >SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2193 Score = 31.1 bits (67), Expect = 1.0 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 Query: 17 EALHRQIDELQQANDKLDKSKKXLQAELEDTNIEL 121 EAL ++D+ + ND L KK L+AE+E+ +L Sbjct: 686 EALKDELDKTEDENDALRDKKKELEAEIEELKRKL 720 Score = 28.3 bits (60), Expect = 7.3 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +2 Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAK 139 L K+V +L Q+D L+ N+KL LQ +L+ +L K Sbjct: 1186 LQKEVSSLKIQLDALKHENNKLQNELTLLQKKLQALQQQLANAEGK 1231 >SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) Length = 496 Score = 30.7 bits (66), Expect = 1.4 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 Query: 245 PRAPPDLSRRRTAPPRHALRPPPY 174 PR PP L R T PPR+ PP Y Sbjct: 276 PRYPPSLIRYPTLPPRYPPSPPRY 299 >SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) Length = 442 Score = 30.3 bits (65), Expect = 1.8 Identities = 12/41 (29%), Positives = 25/41 (60%) Frame = +2 Query: 11 DVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQR 133 ++ L ++++ Q+ D+L+K + EL+DT LEA++ Sbjct: 94 EITRLEEELEKSQKGLDELNKQITDMTRELQDTQTRLEAEK 134 >SB_12781| Best HMM Match : Spindle_assoc (HMM E-Value=0.12) Length = 200 Score = 29.9 bits (64), Expect = 2.4 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +2 Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKK 160 L K VEA I L+ D+L + KK + ELE + +A RA L ++ Sbjct: 127 LQKTVEARESTIRTLECRVDELVRQKKKITEELECVSFNTQAARASKSQLLRE 179 >SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 756 Score = 29.9 bits (64), Expect = 2.4 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +2 Query: 29 RQIDELQQANDKLDKSKK-XLQAELEDTNIELEAQRAKXMXLXKKQK 166 RQ+D+L++ +++D SKK L +LED E + R + KK+K Sbjct: 672 RQLDQLRKQLEQVDLSKKHELLKKLEDVEKEQKKLRKEEEDFHKKEK 718 >SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) Length = 1292 Score = 29.5 bits (63), Expect = 3.2 Identities = 14/46 (30%), Positives = 28/46 (60%) Frame = +2 Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAK 139 L+KD EAL ++ Q +DK+ + ++ L+A+ ++ + L Q+ K Sbjct: 541 LNKDNEALREKLSSSVQIHDKVAELEQALKAKTDELDQVLACQKGK 586 >SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1524 Score = 29.1 bits (62), Expect = 4.2 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Frame = +2 Query: 2 LSKDVEALHRQI----DELQQANDKLDKSKKXLQAELEDTNIELEAQR 133 L +D + LH+ DELQ + ++KK +LE+TNIE+ + R Sbjct: 825 LKRDKDKLHKDYITIDDELQNVRSRYTRTKK----QLEETNIEINSLR 868 >SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) Length = 2478 Score = 29.1 bits (62), Expect = 4.2 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +1 Query: 274 LTRXLDDAAEKIEELERTKRVLQAEWDELANSQ 372 L L +A EK+ ++E T LQAE D L NS+ Sbjct: 738 LQHNLVEAKEKLGKIEETCETLQAEKDMLRNSE 770 >SB_5507| Best HMM Match : TP2 (HMM E-Value=4) Length = 524 Score = 28.7 bits (61), Expect = 5.5 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Frame = +3 Query: 33 RSTSCSRPTTN*TRVKRXFKPSWKTLT*N*KPSEPXLWXLXRNRRASIRWWPKS-VPWRS 209 R TS P T + + +W++ T +P+E R+S RWWP+ +RS Sbjct: 227 RITSPEPPATRPHPDESKLEGAWQSGT---EPTERRKRRFVSPLRSSCRWWPRGRAGYRS 283 Query: 210 GTPPREIRRSTRPXRGDQGALSDQGIR 290 R RR + G +DQG R Sbjct: 284 ARSGR--RRDSAHKATAGGHTADQGAR 308 >SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17) Length = 1426 Score = 28.7 bits (61), Expect = 5.5 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 11 DVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQR 133 D + +++DELQ +LD+S + +EDT +LE Q+ Sbjct: 909 DKNEIQKEMDELQHRWTELDESLHWKEDRIEDTVRKLEIQQ 949 >SB_25754| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 482 Score = 28.7 bits (61), Expect = 5.5 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +3 Query: 693 ESCRLLRPRKAKESFPGPGPSKGTPEQ 773 ES +L+PR+ K S G G S GTP + Sbjct: 129 ESAEMLQPREHKMSILGLGSSTGTPPE 155 >SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) Length = 3071 Score = 28.3 bits (60), Expect = 7.3 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +2 Query: 8 KDVEALHRQIDELQQANDKLDKSKKXLQAEL 100 KD+EA R ID+L+ D L K L+ EL Sbjct: 1508 KDIEAKDRTIDDLRNERDGLVKENGDLKREL 1538 >SB_51279| Best HMM Match : Filament (HMM E-Value=0.092) Length = 778 Score = 28.3 bits (60), Expect = 7.3 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +2 Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXM 145 L++ E+L R +DE + + + L AE++DT +L Q A M Sbjct: 316 LAEGYESLRRHMDEETKFHQEQTSQNAALMAEMQDTINQLRLQLADAM 363 >SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) Length = 458 Score = 27.9 bits (59), Expect = 9.7 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +1 Query: 271 SLTRXLDDAAEKIEELERTKRVLQAEWDELANSQXTADKN 390 SL + + D EK++ +E K L+ +DEL + D+N Sbjct: 194 SLEKSVSDLREKVKLVENEKSELKFAFDELDSKYRVCDEN 233 >SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) Length = 2155 Score = 27.9 bits (59), Expect = 9.7 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = +2 Query: 23 LHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQKSFDK 178 L RQ+ + Q D + + L+ +L N ELE+ ++ L +K + K Sbjct: 609 LERQLQQSHQKEDHMVEELNALKIQLNSANTELESTQSMNEKLKRKLRQLLK 660 >SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) Length = 4160 Score = 27.9 bits (59), Expect = 9.7 Identities = 17/58 (29%), Positives = 26/58 (44%) Frame = +2 Query: 2 LSKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQKSFD 175 L + ++A RQID +Q D+L L+AEL + E + KK S + Sbjct: 2012 LQRQMDAKIRQIDAKEQFIDELRSQNTGLEAELSNIKEEFTENKTGVETTEKKVVSLE 2069 >SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 826 Score = 27.9 bits (59), Expect = 9.7 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +3 Query: 714 PRKAKESFPGPGPSKGTPEQK 776 P ++FPG GP + TPEQ+ Sbjct: 606 PGSPGQTFPGNGPQQATPEQQ 626 >SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3760 Score = 27.9 bits (59), Expect = 9.7 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +2 Query: 14 VEALHRQIDELQQANDKLDKSKKXL--QAELEDTNIELEAQRAK 139 V +LH ++ E+ DKLD K L + E T+++ E ++A+ Sbjct: 1641 VNSLHEKMSEMNDEKDKLDDENKQLLDEKSREVTDLKGEVKKAQ 1684 >SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) Length = 1381 Score = 27.9 bits (59), Expect = 9.7 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = +2 Query: 5 SKDVEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELE 124 +KD+E +++DE +A+ K K LQ+ +E+E Sbjct: 598 TKDLEKTRKKLDEANEASKKAISEKSVLQSRHNTLLVEME 637 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,419,838 Number of Sequences: 59808 Number of extensions: 281625 Number of successful extensions: 1136 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1006 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1134 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2119930593 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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