Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0364.Seq
         (777 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g62640.1 68418.m07862 proline-rich family protein contains pr...    30   1.5  
At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7...    29   3.4  
At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to ...    29   4.5  
At5g44180.1 68418.m05406 homeobox transcription factor, putative...    28   7.9  
At1g21960.1 68414.m02748 zinc finger (C3HC4-type RING finger) fa...    28   7.9  

>At5g62640.1 68418.m07862 proline-rich family protein contains
           proline-rich extensin domains, INTERPRO:IPR002965
          Length = 520

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
 Frame = +2

Query: 2   LSKDVEALHRQIDELQ--QANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQK 166
           L KD E +  QI +L   +A   LDK++K  + +LEDT +++  ++ K     KK++
Sbjct: 41  LKKDPEQIKDQIRKLDMSKAEGALDKARKHKKRQLEDT-LKMVVKKRKEYDEKKKEQ 96


>At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7) /
           HD-ZIP protein 7 / HD-ZIP protein (HB-3) identical to
           homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)
           (HD-ZIP protein ATHB-3) (SP:Q00466) [Arabidopsis
           thaliana]
          Length = 314

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 2   LSKDVEALHRQIDELQQANDKLDKSKKXLQAEL 100
           L +D ++L +Q D L+  ND L    K L AEL
Sbjct: 172 LERDYDSLKKQFDVLKSDNDSLLAHNKKLHAEL 204


>At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to
           SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
           protein  At-Syr1) {Arabidopsis thaliana}
          Length = 304

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 21/86 (24%), Positives = 34/86 (39%)
 Frame = +2

Query: 14  VEALHRQIDELQQANDKLDKSKKXLQAELEDTNIELEAQRAKXMXLXKKQKSFDKXXXXX 193
           +E   +++  + +  DKLDK  K LQA  E++       +A  M   KK    D      
Sbjct: 34  LEDFFKKVQVIDKQYDKLDKLLKKLQASHEESK---SVTKAPAMKAIKKTMEKDVDEVGS 90

Query: 194 XXXXXXXXXXXDQAEHEAXERRPGCS 271
                         E+ A  ++PGC+
Sbjct: 91  IARFIKGKLEELDRENLANRQKPGCA 116


>At5g44180.1 68418.m05406 homeobox transcription factor, putative
            similar to homeobox transcription factor Hox7/homeotic
            protein Hox7 (GI:19486)   {Lycopersicon peruvianum};
            similar to GP|4165087| Williams-Beuren syndrome deletion
            transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
            domain and Pfam  PF00046: Homeobox domain
          Length = 1694

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 685  TNPNLAGFFAPGRQRKASQGRGLPRER 765
            T+P L G  + GR  +  +GRG PR R
Sbjct: 1456 TDPGLGGVSSSGRGGRPPRGRGRPRAR 1482


>At1g21960.1 68414.m02748 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile: PF00097 Zinc
           finger, C3HC4 type (RING finger)
          Length = 204

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -1

Query: 738 GSFPLPSGGEEAGKIRVCFXAXXSSKGVPXPPXFAAS 628
           G   L    ++AG  ++C  A  S   +  PP F  S
Sbjct: 9   GEIDLKPKSQDAGSFKICVSARRSDTSISLPPNFVLS 45


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,836,762
Number of Sequences: 28952
Number of extensions: 185462
Number of successful extensions: 730
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)