Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0360.Seq
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    31   0.013
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    28   0.069
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    27   0.12 

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 30.7 bits (66), Expect = 0.013
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 267 EATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSS 389
           E  E   +I D  +NE A   EKHK G+ K +  + K + S
Sbjct: 55  EGEELKKDIPDALQNECAKCNEKHKEGVRKVIRHLIKNKPS 95


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 267 EATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKR 383
           E  E   +I +  +NE A   EKHK G+ K L  + K +
Sbjct: 56  EGEELKRDIPEALQNECAKCNEKHKEGVRKVLHHLIKNK 94


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 288 EIRDRKENERAVSTEKHKHGITKKLSSITKKR 383
           +I D  +NE A   +KHK GI K +  + K++
Sbjct: 61  DIPDALKNECAKCNDKHKEGIRKVIHYLVKQK 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,523
Number of Sequences: 336
Number of extensions: 3738
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)