Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0358.Seq
(747 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 190 6e-49
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 190 8e-49
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 189 2e-48
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 188 3e-48
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 186 1e-47
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 186 1e-47
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 186 1e-47
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 186 1e-47
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 185 3e-47
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 69 3e-12
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 69 3e-12
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 69 3e-12
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 68 8e-12
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 67 1e-11
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 67 1e-11
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 62 4e-10
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 53 2e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 53 2e-07
At4g23950.1 68417.m03444 expressed protein ; expression supporte... 30 1.4
At3g04200.1 68416.m00444 germin-like protein, putative contains ... 30 1.9
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 29 2.5
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 29 2.5
At3g14230.3 68416.m01802 AP2 domain-containing protein RAP2.2 (R... 29 3.3
At5g37500.1 68418.m04516 guard cell outward rectifying K+ channe... 29 4.3
At5g63760.2 68418.m08003 IBR domain-containing protein contains ... 28 5.7
At5g63760.1 68418.m08002 IBR domain-containing protein contains ... 28 5.7
At3g59430.2 68416.m06629 expressed protein 28 7.6
At3g59430.1 68416.m06628 expressed protein 28 7.6
At5g60120.1 68418.m07537 AP2 domain-containing transcription fac... 27 10.0
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 27 10.0
At1g45160.1 68414.m05177 protein kinase family protein contains ... 27 10.0
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 190 bits (464), Expect = 6e-49
Identities = 98/149 (65%), Positives = 119/149 (79%)
Frame = -3
Query: 703 LRFPWXS*NADLR*VSQ*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFD 524
LRFP N+DLR ++ N+ PR HFF+ GFAP +R S A +LTQQM+D
Sbjct: 240 LRFPGQL-NSDLRKLAV-NLIPFPR-LHFFMVGFAPL-TSRGSQQYSALSVPELTQQMWD 295
Query: 523 AKNMMRLANPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCD 344
AKNMM A+PRHGRYLT +AVFRG++S KEVDEQMMNIQNKNSSYFVEWIPNNVK++VCD
Sbjct: 296 AKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCD 355
Query: 343 IPPRGLKMSATFIGNSTAIQELFKRISEQ 257
I P+GLKM++TFIGNST+IQE+F+R+SEQ
Sbjct: 356 IAPKGLKMASTFIGNSTSIQEMFRRVSEQ 384
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 190 bits (463), Expect = 8e-49
Identities = 98/149 (65%), Positives = 118/149 (79%)
Frame = -3
Query: 703 LRFPWXS*NADLR*VSQ*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFD 524
LRFP N+DLR ++ N+ PR HFF+ GFAP +R S A +LTQQM+D
Sbjct: 240 LRFPGQL-NSDLRKLAV-NLIPFPR-LHFFMVGFAPL-TSRGSQQYSALSVPELTQQMWD 295
Query: 523 AKNMMRLANPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCD 344
AKNMM A+PRHGRYLT +AVFRG+MS KEVDEQMMN+QNKNSSYFVEWIPNNVK++VCD
Sbjct: 296 AKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCD 355
Query: 343 IPPRGLKMSATFIGNSTAIQELFKRISEQ 257
I P GLKM++TFIGNST+IQE+F+R+SEQ
Sbjct: 356 IAPTGLKMASTFIGNSTSIQEMFRRVSEQ 384
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 189 bits (460), Expect = 2e-48
Identities = 95/149 (63%), Positives = 120/149 (80%)
Frame = -3
Query: 703 LRFPWXS*NADLR*VSQ*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFD 524
LRFP N+DLR ++ N+ PR HFF+ GFAP +R S + +LTQQM+D
Sbjct: 241 LRFPGQL-NSDLRKLAV-NLIPFPR-LHFFMVGFAPL-TSRGSQQYISLTVPELTQQMWD 296
Query: 523 AKNMMRLANPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCD 344
+KNMM A+PRHGRYLT +A+FRG+MS KEVDEQ++NIQNKNSSYFVEWIPNNVK++VCD
Sbjct: 297 SKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCD 356
Query: 343 IPPRGLKMSATFIGNSTAIQELFKRISEQ 257
IPP+GLKM+ATF+GNST+IQE+F+R+SEQ
Sbjct: 357 IPPKGLKMAATFVGNSTSIQEMFRRVSEQ 385
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 387 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 427
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 188 bits (459), Expect = 3e-48
Identities = 97/149 (65%), Positives = 118/149 (79%)
Frame = -3
Query: 703 LRFPWXS*NADLR*VSQ*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFD 524
LRFP N+DLR ++ N+ PR HFF+ GFAP +R S A +LTQQM+D
Sbjct: 240 LRFPGQL-NSDLRKLAV-NLIPFPR-LHFFMVGFAPL-TSRGSQQYRALTVPELTQQMWD 295
Query: 523 AKNMMRLANPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCD 344
AKNMM A+PRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCD
Sbjct: 296 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 343 IPPRGLKMSATFIGNSTAIQELFKRISEQ 257
IPP GLKM++TFIGNST+IQE+F+R+SEQ
Sbjct: 356 IPPTGLKMASTFIGNSTSIQEMFRRVSEQ 384
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 186 bits (454), Expect = 1e-47
Identities = 95/149 (63%), Positives = 118/149 (79%)
Frame = -3
Query: 703 LRFPWXS*NADLR*VSQ*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFD 524
LRFP N+DLR ++ N+ PR HFF+ GFAP +R S + +LTQQM+D
Sbjct: 240 LRFPGQL-NSDLRKLAV-NLIPFPR-LHFFMVGFAPL-TSRGSQQYRSLTVPELTQQMWD 295
Query: 523 AKNMMRLANPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCD 344
+KNMM A+PRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCD
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 343 IPPRGLKMSATFIGNSTAIQELFKRISEQ 257
IPP GLKM++TFIGNST+IQE+F+R+SEQ
Sbjct: 356 IPPTGLKMASTFIGNSTSIQEMFRRVSEQ 384
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 186 bits (454), Expect = 1e-47
Identities = 95/149 (63%), Positives = 118/149 (79%)
Frame = -3
Query: 703 LRFPWXS*NADLR*VSQ*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFD 524
LRFP N+DLR ++ N+ PR HFF+ GFAP +R S + +LTQQM+D
Sbjct: 240 LRFPGQL-NSDLRKLAV-NLIPFPR-LHFFMVGFAPL-TSRGSQQYRSLTVPELTQQMWD 295
Query: 523 AKNMMRLANPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCD 344
+KNMM A+PRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCD
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 343 IPPRGLKMSATFIGNSTAIQELFKRISEQ 257
IPP GLKM++TFIGNST+IQE+F+R+SEQ
Sbjct: 356 IPPTGLKMASTFIGNSTSIQEMFRRVSEQ 384
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 186 bits (454), Expect = 1e-47
Identities = 96/149 (64%), Positives = 117/149 (78%)
Frame = -3
Query: 703 LRFPWXS*NADLR*VSQ*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFD 524
LRFP N+DLR ++ N+ PR HFF+ GFAP +R S +LTQQM+D
Sbjct: 240 LRFPGQL-NSDLRKLAV-NLIPFPR-LHFFMVGFAPL-TSRGSQQYRNLTVPELTQQMWD 295
Query: 523 AKNMMRLANPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCD 344
AKNMM A+PRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCD
Sbjct: 296 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 343 IPPRGLKMSATFIGNSTAIQELFKRISEQ 257
IPP GLKM++TFIGNST+IQE+F+R+SEQ
Sbjct: 356 IPPTGLKMASTFIGNSTSIQEMFRRVSEQ 384
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 186 bits (453), Expect = 1e-47
Identities = 93/149 (62%), Positives = 119/149 (79%)
Frame = -3
Query: 703 LRFPWXS*NADLR*VSQ*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFD 524
LRFP N+DLR ++ N+ PR HFF+ GFAP +R S + +LTQQM+D
Sbjct: 241 LRFPGQL-NSDLRKLAV-NLIPFPR-LHFFMVGFAPL-TSRGSQQYISLTVPELTQQMWD 296
Query: 523 AKNMMRLANPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCD 344
AKNMM A+PRHGRYLT +A+FRG+MS KEVDEQ++N+QNKNSSYFVEWIPNNVK++VCD
Sbjct: 297 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCD 356
Query: 343 IPPRGLKMSATFIGNSTAIQELFKRISEQ 257
IPP G+KM++TF+GNST+IQE+F+R+SEQ
Sbjct: 357 IPPTGIKMASTFVGNSTSIQEMFRRVSEQ 385
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 387 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 427
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 185 bits (450), Expect = 3e-47
Identities = 95/149 (63%), Positives = 118/149 (79%)
Frame = -3
Query: 703 LRFPWXS*NADLR*VSQ*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFD 524
LRFP N+DLR ++ N+ PR HFF+ GFAP +R S A +LTQQM+D
Sbjct: 240 LRFPGQL-NSDLRKLAV-NLIPFPR-LHFFMVGFAPL-TSRGSQQYRALTVPELTQQMWD 295
Query: 523 AKNMMRLANPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCD 344
+KNMM A+PRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCD
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 355
Query: 343 IPPRGLKMSATFIGNSTAIQELFKRISEQ 257
I PRGL M++TFIGNST+IQE+F+R+SEQ
Sbjct: 356 IAPRGLSMASTFIGNSTSIQEMFRRVSEQ 384
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 69.3 bits (162), Expect = 3e-12
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Frame = -3
Query: 655 Q*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFDAKNMMRLANPRHGRYL 476
Q N+ PR HF + +AP ++ E A ++T F+ +MM +PRHG+Y+
Sbjct: 256 QTNLVPYPR-IHFMLSSYAPV-ISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
Query: 475 TVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKM 320
++RG + K+V+ + I+ K + FV+W P K + PP ++
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQR 373
Query: 319 SATFIGNSTAIQELFKRISEQLRRCSGAKRSYI 221
+ I NST++ E+F RI + AKR+++
Sbjct: 374 AVCMISNSTSVAEVFSRIDHKF-DLMYAKRAFV 405
Score = 48.0 bits (109), Expect = 7e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 69.3 bits (162), Expect = 3e-12
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Frame = -3
Query: 655 Q*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFDAKNMMRLANPRHGRYL 476
Q N+ PR HF + +AP ++ E A ++T F+ +MM +PRHG+Y+
Sbjct: 256 QTNLVPYPR-IHFMLSSYAPV-ISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
Query: 475 TVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKM 320
++RG + K+V+ + I+ K + FV+W P K + PP ++
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQR 373
Query: 319 SATFIGNSTAIQELFKRISEQLRRCSGAKRSYI 221
+ I NST++ E+F RI + AKR+++
Sbjct: 374 AVCMISNSTSVAEVFSRIDHKF-DLMYAKRAFV 405
Score = 48.0 bits (109), Expect = 7e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 69.3 bits (162), Expect = 3e-12
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Frame = -3
Query: 655 Q*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFDAKNMMRLANPRHGRYL 476
Q N+ PR HF + +AP ++ E A ++T F+ +MM +PRHG+Y+
Sbjct: 256 QTNLVPYPR-IHFMLSSYAPV-ISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
Query: 475 TVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKM 320
++RG + K+V+ + I+ K + FV+W P K + PP ++
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQR 373
Query: 319 SATFIGNSTAIQELFKRISEQLRRCSGAKRSYI 221
+ I NST++ E+F RI + AKR+++
Sbjct: 374 AVCMISNSTSVAEVFSRIDHKF-DLMYAKRAFV 405
Score = 48.0 bits (109), Expect = 7e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 67.7 bits (158), Expect = 8e-12
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Frame = -3
Query: 655 Q*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFDAKNMMRLANPRHGRYL 476
Q N+ PR HF + +AP ++ A ++T +F+ NMM +PRHG+Y+
Sbjct: 256 QTNLVPYPR-IHFMLSSYAPV-ISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYM 313
Query: 475 TVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKM 320
++RG + K+V+ + I+ K + FV+W P K + PP ++
Sbjct: 314 ACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQR 373
Query: 319 SATFIGNSTAIQELFKRISEQ 257
+ I N+TA+ E+F RI +
Sbjct: 374 AVCMISNNTAVAEVFSRIDHK 394
Score = 48.0 bits (109), Expect = 7e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 66.9 bits (156), Expect = 1e-11
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Frame = -3
Query: 655 Q*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFDAKNMMRLANPRHGRYL 476
Q N+ PR HF + +AP ++ A ++T +F+ +MM +PRHG+Y+
Sbjct: 256 QTNLVPYPR-IHFMLSSYAPV-ISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYM 313
Query: 475 TVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKM 320
++RG + K+V+ + I+ K + FV+W P K + PP ++
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQR 373
Query: 319 SATFIGNSTAIQELFKRISEQLRRCSGAKRSYI 221
+ I N+TA+ E+F RI + AKR+++
Sbjct: 374 AVCMISNNTAVAEVFSRIDHKF-DLMYAKRAFV 405
Score = 48.0 bits (109), Expect = 7e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 66.9 bits (156), Expect = 1e-11
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Frame = -3
Query: 655 Q*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFDAKNMMRLANPRHGRYL 476
Q N+ PR HF + +AP ++ A ++T +F+ +MM +PRHG+Y+
Sbjct: 256 QTNLVPYPR-IHFMLSSYAPV-ISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYM 313
Query: 475 TVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKM 320
++RG + K+V+ + I+ K + FV+W P K + PP ++
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQR 373
Query: 319 SATFIGNSTAIQELFKRISEQLRRCSGAKRSYI 221
+ I N+TA+ E+F RI + AKR+++
Sbjct: 374 AVCMISNNTAVAEVFSRIDHKF-DLMYAKRAFV 405
Score = 48.0 bits (109), Expect = 7e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 62.1 bits (144), Expect = 4e-10
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Frame = -3
Query: 655 Q*NIGAVPRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFDAKNMMRLANPRHGRYL 476
Q N+ PR HF + +AP ++ E A ++T F+ +MM +PRHG+Y+
Sbjct: 256 QTNLVPYPR-IHFMLSSYAPV-ISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
Query: 475 TVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKM 320
++RG + K+V+ + I+ K + FV+W P K + PP ++
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQR 373
Query: 319 SATFIGNSTAIQELFKRISEQLRR 248
+ I NST++ E K S++L R
Sbjct: 374 AVCMISNSTSVAE--KENSQRLVR 395
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Frame = -3
Query: 634 PRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFDAKNMM-----RLANPRHGRYLTV 470
PR CHF + G+ P V R++ V + +++ KN+M R +Y+++
Sbjct: 264 PR-CHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISI 322
Query: 469 AAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMSATFIGN 299
+ +G + +V E + I+ + F++W P +++ A+ P ++S + +
Sbjct: 323 LNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGLMLAS 382
Query: 298 STAIQELFKRISEQ 257
T+I+ LF R Q
Sbjct: 383 HTSIRHLFSRCLSQ 396
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Frame = -3
Query: 634 PRDCHFFIPGFAPSDVTRESAVPCADGARKLTQQMFDAKNMMRLANPRH-----GRYLTV 470
PR CHF + G+ P V R++ V + +++ KN+M + R+ +Y+++
Sbjct: 264 PR-CHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISI 322
Query: 469 AAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMSATFIGN 299
+ +G + +V E + I+ + F+EW P +++ A+ P ++S + +
Sbjct: 323 LNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGLMLAS 382
Query: 298 STAIQELFKRISEQ 257
T+I+ LF + Q
Sbjct: 383 HTSIRHLFSKCLSQ 396
>At4g23950.1 68417.m03444 expressed protein ; expression supported
by MPSS
Length = 466
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -1
Query: 729 NVPGRDDXSY-GSPGSV-EMQICVKLASETLVPFPAIATFSYRVSHP 595
NV G+D Y +P SV + + ++LA ETLV IA F + S+P
Sbjct: 165 NVLGKDHDKYLRNPCSVSDKYVVIELAEETLVDTVRIANFEHYSSNP 211
>At3g04200.1 68416.m00444 germin-like protein, putative contains
Pfam profile: PF01072 germin family; similar to germin
type2 GB:CAA63023 [SP|P92996] [Arabidopsis thaliana]
Length = 227
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 557 VSARYC*LPRDVRGCETRYEKVAIAGNGTNVSLANLTQICISTXPG 694
V+ ++C P+ V + Y + IA N TN +N+T + ++ PG
Sbjct: 46 VNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPG 91
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 475 SGSDRGADSQAASCSSRQTSAASTSGHRQRTVLLTPA*RQRVRNPV*KSGNRGER 639
S SD ++S+A S SS ++S++S HR+R R+ R +SG + R
Sbjct: 237 SDSDSDSESEAYSSSSYESSSSSDGKHRKRKSTTRHKGRRGERKSKGRSGKKKAR 291
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 475 SGSDRGADSQAASCSSRQTSAASTSGHRQRTVLLTPA*RQRVRNPV*KSGNRGER 639
S SD ++S+A S SS ++S++S HR+R R+ R +SG + R
Sbjct: 237 SDSDSDSESEAYSSSSYESSSSSDGKHRKRKSTTRHKGRRGERKSKGRSGKKKAR 291
>At3g14230.3 68416.m01802 AP2 domain-containing protein RAP2.2
(RAP2.2) identical to AP2 domain containing protein
RAP2.2 GI:2281629 from [Arabidopsis thaliana]
Length = 374
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 322 MSATFIGNSTAIQELFKRISEQLRRCSGAKRS--YIGIRARVWTRWSS 185
+++ F+ +A + +EQ + S KR Y GIR R W +W++
Sbjct: 89 VASAFVSTGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAA 136
>At5g37500.1 68418.m04516 guard cell outward rectifying K+ channel
(GORK) identical to guard cell outward rectifying K+
channel [Arabidopsis thaliana] gi|11414742|emb|CAC17380;
member of the 1 pore, 6 transmembrane (1P/6TM) Shaker K+
channel family, PMID:11500563
Length = 820
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = -3
Query: 556 GARKLTQQMFDAKNMMRLANPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEW 377
G +KL + + D KN P R L + R + ++ Q + V W
Sbjct: 705 GNKKLIKLLEDVKNAQSSIYPSSLRELQEERIERRKCTVFPFHPQEAKEERSRKHGVVVW 764
Query: 376 IPNNV-KTAVCDIPPRGLKMSATFI 305
IP+N+ K V GL A+F+
Sbjct: 765 IPSNLEKLIVTAAKELGLSDGASFV 789
>At5g63760.2 68418.m08003 IBR domain-containing protein contains
similarity to Swiss-Prot:Q94981 ariadne-1 protein
(Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR
domain
Length = 452
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 483 RPWRGFASRIMFFASNICCVNFRAPSAHGTADSRVT-SEGAKPGMKKW 623
RPW F + + + C FR+P HGT+ S + + + G W
Sbjct: 221 RPWAQFLTCVC--SGRFCWKCFRSPETHGTSGSCLAPARSSNVGFNHW 266
>At5g63760.1 68418.m08002 IBR domain-containing protein contains
similarity to Swiss-Prot:Q94981 ariadne-1 protein
(Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR
domain
Length = 452
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 483 RPWRGFASRIMFFASNICCVNFRAPSAHGTADSRVT-SEGAKPGMKKW 623
RPW F + + + C FR+P HGT+ S + + + G W
Sbjct: 221 RPWAQFLTCVC--SGRFCWKCFRSPETHGTSGSCLAPARSSNVGFNHW 266
>At3g59430.2 68416.m06629 expressed protein
Length = 451
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +1
Query: 448 CDLGRQRPQSGSDRGADSQAASCSSRQTSAASTSGHRQRTVLLTPA*RQRVRNPV*KSGN 627
CD R+R SD G C +++S T GH +R L+P + P N
Sbjct: 202 CDSMRRRKSPHSDLGI----TECKKQKSSGQDTDGHVRRESSLSPPMKDNAHLPSDHHPN 257
Query: 628 RGER 639
GER
Sbjct: 258 -GER 260
>At3g59430.1 68416.m06628 expressed protein
Length = 451
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +1
Query: 448 CDLGRQRPQSGSDRGADSQAASCSSRQTSAASTSGHRQRTVLLTPA*RQRVRNPV*KSGN 627
CD R+R SD G C +++S T GH +R L+P + P N
Sbjct: 202 CDSMRRRKSPHSDLGI----TECKKQKSSGQDTDGHVRRESSLSPPMKDNAHLPSDHHPN 257
Query: 628 RGER 639
GER
Sbjct: 258 -GER 260
>At5g60120.1 68418.m07537 AP2 domain-containing transcription
factor, putative Similar to Floral homeotic protein
APETALA2 protein (SP:P47927) [Arabidopsis thaliana];
homolog HAP2, Hyacinthus orientalis, EMBL:AF134116
Length = 485
Score = 27.5 bits (58), Expect = 10.0
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = -3
Query: 370 NNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQLRRCSGAKRSYIGIRARVW 200
N++ A CD P LK + + N A+ F E+ RS+ AR W
Sbjct: 349 NHMAAAACDTPFNFLKRGSDHLNNRHALPSAFFSPMERTPEKGLMLRSHQSFPARTW 405
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 27.5 bits (58), Expect = 10.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 483 RPWRGFASRIMFFASNI 533
RPWRG+ SR++F+ SN+
Sbjct: 248 RPWRGY-SRVIFYNSNL 263
>At1g45160.1 68414.m05177 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 1067
Score = 27.5 bits (58), Expect = 10.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 579 SRVTSEGAKPGMKKWQSRGTAPMFHWLT*RRSAF 680
S V SEG P + +W+++G MF L +AF
Sbjct: 471 SGVASEGCSPKINEWRNKGLEGMFEDLHEMDTAF 504
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,948,503
Number of Sequences: 28952
Number of extensions: 264332
Number of successful extensions: 913
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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