Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0357.Seq
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-30|CAB61063.1|  365|Caenorhabditis elegans Hypothetical...    30   2.1  
Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical...    28   6.4  
U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>AL132948-30|CAB61063.1|  365|Caenorhabditis elegans Hypothetical
           protein Y39B6A.39 protein.
          Length = 365

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
 Frame = +3

Query: 117 SSGSVQFKVRAANDAHIALTTGP---QESDPMYEVMIGGWGNAKSVIRKIEPSPIRLKL- 284
           ++G  ++K R+  D    LT  P   +E DP  +     W  A++    + P P+R+   
Sbjct: 70  ATGRTEYKTRSRFDLMDRLTKRPPRSEEMDPEAQKWCDVWPAARTFASSVVPLPVRMGTR 129

Query: 285 ----KAPEFLTEGNIVVFGFVGIAALSP 356
               K   F  EGN+ +        L+P
Sbjct: 130 PNVEKRAPFKKEGNLELVKIPNFLHLTP 157


>Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical
           protein T12G3.1 protein.
          Length = 693

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 467 IEVPPTAPVAAALYQPPLATLEAT-EETYPL 556
           + V PTAP+   L  PPL  +E+  EE  P+
Sbjct: 547 VPVTPTAPIVETLIVPPLPPVESNPEEVTPM 577


>Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical
           protein C53B4.2 protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 339 IAALSPLDARVKLFHSYLGLIPNLSQFTTSE 431
           I A SPLD + K+F   +   P LS++TT E
Sbjct: 189 IKATSPLDDKSKMFMDRIVKKPYLSKYTTKE 219


>AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical
           protein F32D1.7 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 414 GKGSGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSP 307
           G GSGS  D +G + P+R +  +P +     PR  P
Sbjct: 159 GSGSGSGNDSSGSSGPTRMSGQVPSTSGPPPPRPPP 194


>U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical
           protein W03B1.6 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -3

Query: 118 ETGKNWY*RLSSVATSMTLAMIVV 47
           ET + WY +LSS +T+M +A++ V
Sbjct: 15  ETFEKWYLKLSSTSTAMLIAILFV 38


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,609,513
Number of Sequences: 27780
Number of extensions: 403230
Number of successful extensions: 1178
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)