Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0356.Seq
         (328 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   2.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    20   7.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    20   7.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    20   7.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 156 KTECLCTFSLVIHLISF 106
           KT+  CT  ++ HLI F
Sbjct: 37  KTDKNCTIVIIFHLILF 53


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +2

Query: 182 LCSQCSRLIVKV*VILIKDYEL*RIIILVHVLN 280
           LC  C R+  ++  I++  +    + IL+ + N
Sbjct: 276 LCRLCKRVDEEISYIVLMSFASDLLFILIQLFN 308


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +2

Query: 182 LCSQCSRLIVKV*VILIKDYEL*RIIILVHVLN 280
           LC  C R+  ++  I++  +    + IL+ + N
Sbjct: 276 LCRLCKRVDEEISYIVLMSFASDLLFILIQLFN 308


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +2

Query: 182 LCSQCSRLIVKV*VILIKDYEL*RIIILVHVLN 280
           LC  C R+  ++  I++  +    + IL+ + N
Sbjct: 276 LCRLCKRVDEEISYIVLMSFASDLLFILIQLFN 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,135
Number of Sequences: 336
Number of extensions: 948
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)