Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0355.Seq
(752 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 173 2e-43
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 173 2e-43
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 173 2e-43
AE014298-2217|AAF48509.2| 1304|Drosophila melanogaster CG17209-P... 89 8e-18
Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subuni... 81 2e-15
AY121632-1|AAM51959.1| 542|Drosophila melanogaster GM01935p pro... 81 2e-15
AE013599-1910|AAF58234.1| 1642|Drosophila melanogaster CG10122-P... 81 2e-15
AY118327-1|AAM48356.1| 340|Drosophila melanogaster LD21120p pro... 30 2.9
AF170829-4|AAD49741.1| 340|Drosophila melanogaster putative mRN... 30 2.9
AE014297-2617|AAF55627.1| 340|Drosophila melanogaster CG6011-PA... 30 2.9
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 173 bits (421), Expect = 2e-43
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +2
Query: 254 VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGG 433
VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGG
Sbjct: 1079 VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGG 1138
Query: 434 AARDAEKAKNVLCRLEHTTLRKVTA 508
AARDAEKAKNVLCRLEHTTLRKVTA
Sbjct: 1139 AARDAEKAKNVLCRLEHTTLRKVTA 1163
Score = 149 bits (361), Expect = 4e-36
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +3
Query: 3 DLSPIKVIKGVSDLLKKCVIVAGDDRLSKQANENATLLFQCLVRSTLCTKFVSEEHRLSS 182
DLSPI+VIKGV LL++CVIV G+DR+SKQANENATLLFQCL+RSTLCTK+VSEE RLS+
Sbjct: 995 DLSPIRVIKGVKTLLERCVIVTGNDRISKQANENATLLFQCLIRSTLCTKYVSEEFRLST 1054
Query: 183 VAFEWLIGEIEARFQQAQVNPGEM 254
AFEWL+GEIE RFQQAQ NPGEM
Sbjct: 1055 EAFEWLVGEIETRFQQAQANPGEM 1078
Score = 72.1 bits (169), Expect = 7e-13
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1
Query: 511 TAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDP 606
TAIYYDPDPQ TVI+EDQEFVNVYYEMPDFDP
Sbjct: 1165 TAIYYDPDPQRTVISEDQEFVNVYYEMPDFDP 1196
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/35 (68%), Positives = 27/35 (77%), Gaps = 2/35 (5%)
Frame = +3
Query: 618 RLGYW--RIELDRKRMTDKKLTWEQIAEENLMAGF 716
R+ W RIELDRKRMTDKKLT EQIAE+ + GF
Sbjct: 1198 RISPWLLRIELDRKRMTDKKLTMEQIAEK-INVGF 1231
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p
protein.
Length = 1429
Score = 173 bits (421), Expect = 2e-43
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +2
Query: 254 VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGG 433
VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGG
Sbjct: 621 VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGG 680
Query: 434 AARDAEKAKNVLCRLEHTTLRKVTA 508
AARDAEKAKNVLCRLEHTTLRKVTA
Sbjct: 681 AARDAEKAKNVLCRLEHTTLRKVTA 705
Score = 149 bits (361), Expect = 4e-36
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +3
Query: 3 DLSPIKVIKGVSDLLKKCVIVAGDDRLSKQANENATLLFQCLVRSTLCTKFVSEEHRLSS 182
DLSPI+VIKGV LL++CVIV G+DR+SKQANENATLLFQCL+RSTLCTK+VSEE RLS+
Sbjct: 537 DLSPIRVIKGVKTLLERCVIVTGNDRISKQANENATLLFQCLIRSTLCTKYVSEEFRLST 596
Query: 183 VAFEWLIGEIEARFQQAQVNPGEM 254
AFEWL+GEIE RFQQAQ NPGEM
Sbjct: 597 EAFEWLVGEIETRFQQAQANPGEM 620
Score = 72.1 bits (169), Expect = 7e-13
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1
Query: 511 TAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDP 606
TAIYYDPDPQ TVI+EDQEFVNVYYEMPDFDP
Sbjct: 707 TAIYYDPDPQRTVISEDQEFVNVYYEMPDFDP 738
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/35 (68%), Positives = 27/35 (77%), Gaps = 2/35 (5%)
Frame = +3
Query: 618 RLGYW--RIELDRKRMTDKKLTWEQIAEENLMAGF 716
R+ W RIELDRKRMTDKKLT EQIAE+ + GF
Sbjct: 740 RISPWLLRIELDRKRMTDKKLTMEQIAEK-INVGF 773
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 173 bits (421), Expect = 2e-43
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +2
Query: 254 VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGG 433
VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGG
Sbjct: 1079 VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGG 1138
Query: 434 AARDAEKAKNVLCRLEHTTLRKVTA 508
AARDAEKAKNVLCRLEHTTLRKVTA
Sbjct: 1139 AARDAEKAKNVLCRLEHTTLRKVTA 1163
Score = 149 bits (361), Expect = 4e-36
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +3
Query: 3 DLSPIKVIKGVSDLLKKCVIVAGDDRLSKQANENATLLFQCLVRSTLCTKFVSEEHRLSS 182
DLSPI+VIKGV LL++CVIV G+DR+SKQANENATLLFQCL+RSTLCTK+VSEE RLS+
Sbjct: 995 DLSPIRVIKGVKTLLERCVIVTGNDRISKQANENATLLFQCLIRSTLCTKYVSEEFRLST 1054
Query: 183 VAFEWLIGEIEARFQQAQVNPGEM 254
AFEWL+GEIE RFQQAQ NPGEM
Sbjct: 1055 EAFEWLVGEIETRFQQAQANPGEM 1078
Score = 72.1 bits (169), Expect = 7e-13
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1
Query: 511 TAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDP 606
TAIYYDPDPQ TVI+EDQEFVNVYYEMPDFDP
Sbjct: 1165 TAIYYDPDPQRTVISEDQEFVNVYYEMPDFDP 1196
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/35 (68%), Positives = 27/35 (77%), Gaps = 2/35 (5%)
Frame = +3
Query: 618 RLGYW--RIELDRKRMTDKKLTWEQIAEENLMAGF 716
R+ W RIELDRKRMTDKKLT EQIAE+ + GF
Sbjct: 1198 RISPWLLRIELDRKRMTDKKLTMEQIAEK-INVGF 1231
>AE014298-2217|AAF48509.2| 1304|Drosophila melanogaster CG17209-PA
protein.
Length = 1304
Score = 88.6 bits (210), Expect = 8e-18
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = +2
Query: 254 VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGG 433
VGA+AAQS+GEP TQMTL TFHFAGV+S N+T GVPR+ EIIN +K P +T L
Sbjct: 946 VGAIAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELEN- 1004
Query: 434 AARDAEKAKNVLCRLEHTTLRKVTA 508
E A+ V R+E TTL ++++
Sbjct: 1005 -CHSMEFARQVKARIEKTTLAELSS 1028
>Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subunit of
RNA polymeraseI (A) protein.
Length = 1644
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/70 (55%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 254 VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI-SKKPKAPSLTVFLTG 430
VG +AAQS+GEP+TQMTLNTFHFAG NVTLG+PRL+EI+ + S K PS+ + +
Sbjct: 1179 VGLIAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASSNIKTPSMDIPIKP 1238
Query: 431 GAARDAEKAK 460
G AEK +
Sbjct: 1239 GQQHQAEKLR 1248
>AY121632-1|AAM51959.1| 542|Drosophila melanogaster GM01935p
protein.
Length = 542
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/70 (55%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 254 VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI-SKKPKAPSLTVFLTG 430
VG +AAQS+GEP+TQMTLNTFHFAG NVTLG+PRL+EI+ + S K PS+ + +
Sbjct: 78 VGLIAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASSNIKTPSMDIPIKP 137
Query: 431 GAARDAEKAK 460
G AEK +
Sbjct: 138 GQQHQAEKLR 147
>AE013599-1910|AAF58234.1| 1642|Drosophila melanogaster CG10122-PA
protein.
Length = 1642
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/70 (55%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 254 VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI-SKKPKAPSLTVFLTG 430
VG +AAQS+GEP+TQMTLNTFHFAG NVTLG+PRL+EI+ + S K PS+ + +
Sbjct: 1178 VGLIAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASSNIKTPSMDIPIKP 1237
Query: 431 GAARDAEKAK 460
G AEK +
Sbjct: 1238 GQQHQAEKLR 1247
>AY118327-1|AAM48356.1| 340|Drosophila melanogaster LD21120p
protein.
Length = 340
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -1
Query: 332 IHQQNGRYSMSSE*LAHQVIEQLKRLHFTWIYLCLLESCLYFPDKPFKC 186
IH + GR + S+ +AH + ++ +R + + + + YFP P KC
Sbjct: 282 IHARTGREKIFSKNVAHVMNDETQRKYIQGLKRLMTKCQEYFPTDPSKC 330
>AF170829-4|AAD49741.1| 340|Drosophila melanogaster putative mRNA
splicing factor protein.
Length = 340
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -1
Query: 332 IHQQNGRYSMSSE*LAHQVIEQLKRLHFTWIYLCLLESCLYFPDKPFKC 186
IH + GR + S+ +AH + ++ +R + + + + YFP P KC
Sbjct: 282 IHARTGREKIFSKNVAHVMNDETQRKYIQGLKRLMTKCQEYFPTDPSKC 330
>AE014297-2617|AAF55627.1| 340|Drosophila melanogaster CG6011-PA
protein.
Length = 340
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -1
Query: 332 IHQQNGRYSMSSE*LAHQVIEQLKRLHFTWIYLCLLESCLYFPDKPFKC 186
IH + GR + S+ +AH + ++ +R + + + + YFP P KC
Sbjct: 282 IHARTGREKIFSKNVAHVMNDETQRKYIQGLKRLMTKCQEYFPTDPSKC 330
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,979,259
Number of Sequences: 53049
Number of extensions: 672994
Number of successful extensions: 1475
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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