Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0352.Seq
         (728 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax...    31   5.6  
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.            31   5.6  
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.            31   5.6  
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.     31   5.6  

>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
            protein 2 protein.
          Length = 2677

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -1

Query: 485  SRITELQKQLSITTEKSPSIKSKTKLIRSQIKL 387
            SRI  L K L  ++  SPS+K+K+K I+S +K+
Sbjct: 1605 SRIAGLSKSLETSSALSPSLKNKSKGIQSILKV 1637


>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
          Length = 2677

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -1

Query: 485  SRITELQKQLSITTEKSPSIKSKTKLIRSQIKL 387
            SRI  L K L  ++  SPS+K+K+K I+S +K+
Sbjct: 1605 SRIAGLSKSLETSSALSPSLKNKSKGIQSILKV 1637


>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
          Length = 2677

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -1

Query: 485  SRITELQKQLSITTEKSPSIKSKTKLIRSQIKL 387
            SRI  L K L  ++  SPS+K+K+K I+S +K+
Sbjct: 1605 SRIAGLSKSLETSSALSPSLKNKSKGIQSILKV 1637


>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
          Length = 2663

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -1

Query: 485  SRITELQKQLSITTEKSPSIKSKTKLIRSQIKL 387
            SRI  L K L  ++  SPS+K+K+K I+S +K+
Sbjct: 1591 SRIAGLSKSLETSSALSPSLKNKSKGIQSILKV 1623


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,229,991
Number of Sequences: 237096
Number of extensions: 1488046
Number of successful extensions: 2590
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2590
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)