Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0351.Seq
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    28   0.084
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.45 
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 27.9 bits (59), Expect = 0.084
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +1

Query: 385  NNQSDNTQEDNNTLDNIRGHNNRMGSILGHNSSVDSTPGHNTGRAI-PRSAISGLSXP 555
            N+ S  + + + T  +  G     GS+   +S  DS  G+NTG A+ P     G S P
Sbjct: 933  NSASPASSDRSGTPRSTNGDRKPGGSLGALSSMFDSLSGNNTGDALAPSGGKKGSSHP 990


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 459 QYPGAQQLGGQYPGAQY 509
           +YPGA+++GGQ    +Y
Sbjct: 298 EYPGAEKMGGQLSDKEY 314



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -1

Query: 274  CCGGSTPTTDALS-ALELVRASP 209
            CCGGS P   +L+  L L+  +P
Sbjct: 976  CCGGSFPLLRSLNRGLGLIPDNP 998


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = -1

Query: 322 PGCIPGYCPGAGAKGMC 272
           PGC+P   P     G C
Sbjct: 53  PGCVPKPIPSFACIGRC 69


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 453 DGQYPGAQQLGGQY 494
           D +YPGA   GG +
Sbjct: 143 DWEYPGAADRGGSF 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,830
Number of Sequences: 336
Number of extensions: 2743
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)