Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0350.Seq
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    26   0.28 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.9  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +2

Query: 461 MDDI--EFLADYPQYTGQRHIVWAIPDGVSETSLGGPDQGQSKNALHNYW 604
           +DDI  E+ A  P+YT +  + +    G++ +++    QG SKN  + +W
Sbjct: 406 IDDIFQEYKATLPRYT-ENQLNYP---GITVSNIEVQSQGSSKNTFNTFW 451


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 588 RYTTIGXRWDNHLRKWENVVLGTXXY 665
           RYTT    W   +  WE V LG   Y
Sbjct: 670 RYTTYSDVWSFGVLLWEIVTLGGTPY 695


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 18/65 (27%), Positives = 23/65 (35%)
 Frame = -3

Query: 335 RPVRCPKLGR*F*RKPVVVHEDSSQAPEAPRCPXXXXXXXXXXXXXRVIISQRGESGPIF 156
           +P  C K    F R+  +VH       EA R P             R      G  GP+ 
Sbjct: 245 KPFECDKCRGRFRRRHHLVHHKCGGEEEAERAPAPAVRAAGDAAAARGAARADGAGGPL- 303

Query: 155 ENHRP 141
            +HRP
Sbjct: 304 HDHRP 308


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 354  SASHHSKSISRTNKKCVSFILLFMTFSDINVSWTRP 461
            S S ++ SIS   KK ++++   M+ +   VS  RP
Sbjct: 1403 STSSNNPSISAFRKKSLAYVQQRMSIAPNRVSQARP 1438


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 354  SASHHSKSISRTNKKCVSFILLFMTFSDINVSWTRP 461
            S S ++ SIS   KK ++++   M+ +   VS  RP
Sbjct: 1403 STSSNNPSISAFRKKSLAYVQQRMSIAPNRVSQARP 1438


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/27 (25%), Positives = 19/27 (70%)
 Frame = -1

Query: 436 SENVINNRINETHFLFVLEIDLLWWLA 356
           +EN I++++ + +  F++ + L+W +A
Sbjct: 427 NENTIHSKLCKLYATFLIALKLVWIVA 453


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 372 KSISRTNKKCVSFILLF 422
           K++ +TNK C +FI+LF
Sbjct: 313 KTVLKTNKYC-NFIILF 328


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 359 CREDEPLLRPVRCPKLG 309
           C++D P++R     KLG
Sbjct: 176 CQDDTPMVRRAAATKLG 192


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 559 RARPRAEQERATQLLEXAGTT 621
           RARP A   R  +LL  AGT+
Sbjct: 243 RARPLARTCRDNRLLVLAGTS 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,576
Number of Sequences: 336
Number of extensions: 3588
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)