Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0348.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    25   0.79 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.79 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   5.5  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   7.3  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -1

Query: 641 SINIKSLSPSSPCRITVSPGRHWTGNIASNISALSDSSKCVNN 513
           S N    SP+S    T+   R W  +    +S  + ++ C NN
Sbjct: 213 SANSSIWSPASIDSFTLEQHRSWCSSSQPVLSTTNSTTNCYNN 255


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -1

Query: 596 TVSPGRHWTGNIASNISALSDSSKCVNNTLMQ*RVIRHPLFC 471
           T  PG  +TG+   N   L DSS C+N    Q     +   C
Sbjct: 48  TCKPG--FTGSNCQNRINLCDSSPCLNGATCQDHTTHYTCHC 87


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 55  FIPKKLKFTMDILSLF 8
           F P  L+F ++ILS+F
Sbjct: 312 FRPSSLRFCLNILSIF 327


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory
          receptor candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 55 FIPKKLKFTMDILSLF 8
          F P  L+F ++ILS+F
Sbjct: 37 FRPSSLRFCLNILSIF 52


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 282 IRTRTGQSCSSCSCC 326
           IRT TG+   SC+ C
Sbjct: 27  IRTHTGEKPFSCTYC 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,935
Number of Sequences: 336
Number of extensions: 3295
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)