Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0348.Seq
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    26   0.30 

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = +1

Query: 514 LFTHLDESERADMFDAMFPVQCLPGETVIRQGDEGDKLFILIDSRRG*GFSVKRAET 684
           +F +L E     + D +       G+ +IRQG  GD  FI+  SR     ++K+ +T
Sbjct: 220 IFKNLPEETLIKISDVLEETFYNNGDYIIRQGARGDTFFII--SRGQVRVTIKQPDT 274



 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 586 GETVIRQGDEGDKLFILIDSR 648
           G T+IR+GD G  ++++ + +
Sbjct: 126 GSTIIREGDVGSIVYVMEEGK 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,535
Number of Sequences: 438
Number of extensions: 3636
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)