Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0343.Seq
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   133   1e-31
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    33   0.29 
Z29094-13|CAI79130.1|  296|Caenorhabditis elegans Hypothetical p...    29   3.5  
Z81030-7|CAB02711.1|  366|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z75554-11|CAA99961.1|  301|Caenorhabditis elegans Hypothetical p...    28   6.2  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  133 bits (322), Expect = 1e-31
 Identities = 60/81 (74%), Positives = 71/81 (87%)
 Frame = +1

Query: 265 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 444
           APA+ GAIAP  V +P  NTG+GPEKTSFFQAL IPTKI++GTIEI+NDVH++K GDKVG
Sbjct: 109 APAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVG 168

Query: 445 ASEATLLNMLNISPFSYGLVV 507
           ASE+ LLNML ++PFSYGLVV
Sbjct: 169 ASESALLNMLGVTPFSYGLVV 189



 Score =  129 bits (312), Expect = 2e-30
 Identities = 59/104 (56%), Positives = 75/104 (72%)
 Frame = +2

Query: 5   DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 184
           +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM+RKA++ HL  NP+LEKLLPH
Sbjct: 22  EEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPH 81

Query: 185 IKGNVGFVFTRGDLVEVRDKLLETKSKLQLVLVPLPHCQSSFPP 316
           I  NVGFVFT+ DL E+R KLLE +         +  C    PP
Sbjct: 82  IVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPP 125



 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 31/60 (51%), Positives = 43/60 (71%)
 Frame = +3

Query: 510 QVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIGQWFQEPFG 689
           QVYD GT++ PE+LD+  E+LR +F +GV NVA++SLA+ YPT+AS  HS+    Q   G
Sbjct: 191 QVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLG 250


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   LDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEKL 175
           +D+Y   FI    N+ S +   IR   + +S    GKN ++  A+     +  A  L K 
Sbjct: 34  VDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKA 93

Query: 176 LPHIKGNVGFVFTRGDLVEVRDKLLETKSK 265
              +KG  G +FT     EV  +  E   +
Sbjct: 94  SAILKGQCGLMFTNMSKKEVEAEFSEASEE 123


>Z29094-13|CAI79130.1|  296|Caenorhabditis elegans Hypothetical
           protein C07A9.13 protein.
          Length = 296

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +2

Query: 137 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLETKSKLQLVLVPLPHCQ 301
           KDHL  +  +EK +   K N  F++   D  E R K +  K   + ++    HC+
Sbjct: 185 KDHLGKSAMIEKKIIADKFNSNFIWIHVDSAEGRYKQMRMKDNQEFIIFG-EHCR 238


>Z81030-7|CAB02711.1|  366|Caenorhabditis elegans Hypothetical
           protein C01G10.9 protein.
          Length = 366

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = -2

Query: 554 VQNFRCKNSSRIIYLLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSLM 402
           ++    +N  +++Y+L TRPY  G     +  +  E P     FK+ T  M
Sbjct: 197 IRALHSENRLKLVYVLETRPYNQGIRLTSIELLHGEVP-----FKLITDSM 242


>Z75554-11|CAA99961.1|  301|Caenorhabditis elegans Hypothetical
           protein ZC455.8a protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 454 ATLLNMLNISP-FSYGLVVSRYMILELFLHLKFWTSNQKISV 576
           ATLL+   +S  F  G ++S   ++ +FL +KF  + QKIS+
Sbjct: 88  ATLLSSNVVSTRFFLGALISIERLIAVFLPVKFHNNRQKISI 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,037,214
Number of Sequences: 27780
Number of extensions: 396108
Number of successful extensions: 1199
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)