Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0342.Seq
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1339 + 32760424-32760584,32762428-32764462 122 3e-28
02_05_0737 - 31328473-31330513,31331015-31331184 120 1e-27
08_01_0471 - 4147170-4149207,4150535-4150692 116 2e-26
03_06_0221 + 32458867-32459149,32460271-32460386,32460461-324608... 89 4e-18
05_01_0355 - 2774217-2774318,2774608-2774775,2774872-2775090,277... 78 6e-15
01_04_0017 - 15113479-15113580,15113950-15114117,15115011-151152... 75 7e-14
01_04_0018 + 15128174-15128316,15128445-15128544,15129573-151297... 71 7e-13
07_01_1204 - 11469953-11470618 31 0.67
01_06_0994 + 33653055-33653144,33653219-33653310,33653483-336535... 31 0.67
04_04_1584 + 34601927-34602144,34603324-34603510,34604239-346044... 29 2.7
01_06_0312 + 28396860-28397951 29 2.7
02_02_0393 - 9711835-9712388,9712438-9712657,9713007-9713271,971... 29 4.7
02_02_0392 - 9649858-9650405,9650499-9650670,9650788-9650926,965... 29 4.7
01_05_0039 - 17486716-17487855 29 4.7
01_06_0998 + 33685051-33685143,33685231-33685322,33685490-336855... 28 6.2
02_02_0400 + 9836045-9837115,9837474-9838577 28 8.2
>04_04_1339 + 32760424-32760584,32762428-32764462
Length = 731
Score = 122 bits (294), Expect = 3e-28
Identities = 51/84 (60%), Positives = 70/84 (83%)
Frame = +2
Query: 2 RFDHFLQNSFNNDKIFKHMITSDFEYFLNLNNKSPEFLSLFIDGKLKKGEKGMSEQEIEA 181
++D + SF+NDK F++ + S FE F+NLNN+SPEF+SLF+D KL+KG KG +E+++E
Sbjct: 342 KYDEIISISFSNDKAFQNALNSSFENFINLNNRSPEFISLFVDDKLRKGVKGANEEDVET 401
Query: 182 VLDKTMVLFRFLQEKDVFERYYKQ 253
VLDK M+LFR+LQEKDVFE+YYKQ
Sbjct: 402 VLDKVMMLFRYLQEKDVFEKYYKQ 425
Score = 78.2 bits (184), Expect = 6e-15
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +1
Query: 280 KSVSDDSEKNMISKLKTECGCQFTSKLEGMFKDMTVSNTIMDEFKEHVLSSGLNLYGVDL 459
K+ SD++E++M+ KLKTECG QFTSKLEGMF D+ S+ M F ++ SG + +
Sbjct: 435 KTTSDEAERSMLVKLKTECGYQFTSKLEGMFNDLKTSHDTMQSFYANL--SG-DTDSPTI 491
Query: 460 SVRVLTTGFWPTQSAT 507
SV++LTTG WPTQ T
Sbjct: 492 SVQILTTGSWPTQPCT 507
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 513 CNIPAAPRXAFEVFRSFYLANTPGRQLSLQPQLGSADLHATXG 641
C +P E FR+FYL GR+L+ Q +G+AD+ AT G
Sbjct: 509 CKLPPEIVDISEKFRAFYLGTHNGRRLTWQTNMGNADIKATFG 551
>02_05_0737 - 31328473-31330513,31331015-31331184
Length = 736
Score = 120 bits (289), Expect = 1e-27
Identities = 49/84 (58%), Positives = 69/84 (82%)
Frame = +2
Query: 2 RFDHFLQNSFNNDKIFKHMITSDFEYFLNLNNKSPEFLSLFIDGKLKKGEKGMSEQEIEA 181
+ D + +F NDK F++ + S FEYF+NLNN+SPEF+SL++D KL+KG KG +E+++E
Sbjct: 345 KHDKIINVAFGNDKTFQNALNSSFEYFINLNNRSPEFISLYVDDKLRKGLKGATEEDVEV 404
Query: 182 VLDKTMVLFRFLQEKDVFERYYKQ 253
+LDK M+LFR+LQEKDVFE+YYKQ
Sbjct: 405 ILDKVMMLFRYLQEKDVFEKYYKQ 428
Score = 79.4 bits (187), Expect = 3e-15
Identities = 42/73 (57%), Positives = 49/73 (67%)
Frame = +1
Query: 280 KSVSDDSEKNMISKLKTECGCQFTSKLEGMFKDMTVSNTIMDEFKEHVLSSGLNLYGVDL 459
K+VSDD+E++MI KLKTECG QFTSKLEGMF DM S M +F + S G L
Sbjct: 438 KTVSDDAERSMIVKLKTECGYQFTSKLEGMFTDMKTSQDTMIDF--YAKKSEELGDGPTL 495
Query: 460 SVRVLTTGFWPTQ 498
V +LTTG WPTQ
Sbjct: 496 DVHILTTGSWPTQ 508
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 513 CNIPAAPRXAFEVFRSFYLANTPGRQLSLQPQLGSADLHATXG 641
CN+P + FR++YL GR+L+ Q +G+AD+ AT G
Sbjct: 513 CNLPTEILAICDKFRTYYLGTHSGRRLTWQTNMGTADIKATFG 555
>08_01_0471 - 4147170-4149207,4150535-4150692
Length = 731
Score = 116 bits (278), Expect = 2e-26
Identities = 47/84 (55%), Positives = 69/84 (82%)
Frame = +2
Query: 2 RFDHFLQNSFNNDKIFKHMITSDFEYFLNLNNKSPEFLSLFIDGKLKKGEKGMSEQEIEA 181
++D + SF+NDK F++ + S FE+F+NLNN+ PEF+SL++D KL+KG K +E+++E
Sbjct: 341 KYDSIVTTSFSNDKSFQNALNSSFEHFINLNNRCPEFISLYVDDKLRKGMKEANEEDVET 400
Query: 182 VLDKTMVLFRFLQEKDVFERYYKQ 253
VLDK M+LFR+LQEKD+FE+YYKQ
Sbjct: 401 VLDKVMMLFRYLQEKDLFEKYYKQ 424
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/73 (52%), Positives = 47/73 (64%)
Frame = +1
Query: 280 KSVSDDSEKNMISKLKTECGCQFTSKLEGMFKDMTVSNTIMDEFKEHVLSSGLNLYGVDL 459
K+ SDDSE++M+ KLKTECG QFTSKLEGMF D+ S+ F G +
Sbjct: 434 KAASDDSERSMLVKLKTECGYQFTSKLEGMFNDLKTSHDTTQRFYAGTPDLG---DAPTI 490
Query: 460 SVRVLTTGFWPTQ 498
SV++LTTG WPTQ
Sbjct: 491 SVQILTTGSWPTQ 503
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 513 CNIPAAPRXAFEVFRSFYLANTPGRQLSLQPQLGSADLHATXG 641
CN+P E+FR FYL GR+L+ Q +G+AD+ A G
Sbjct: 508 CNLPPEILGVSEMFRGFYLGTHNGRRLTWQTNMGTADIKAVFG 550
>03_06_0221 +
32458867-32459149,32460271-32460386,32460461-32460807,
32461231-32461411,32461507-32461629,32461828-32462115,
32462536-32462688,32463068-32463169,32463260-32463313,
32463518-32463624,32463867-32463927,32464019-32464150,
32464245-32464382,32464459-32464539,32464635-32464715,
32465133-32465213,32465300-32465413
Length = 813
Score = 88.6 bits (210), Expect = 4e-18
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +1
Query: 280 KSVSDDSEKNMISKLKTECGCQFTSKLEGMFKDMTVSNTIMDEFKEHVLSSGLNLYGVDL 459
KS S D+EK+MI+KLKTECG QFT+KLEGMFKD+ +S I + FK+ + G+++
Sbjct: 518 KSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEM 577
Query: 460 SVRVLTTGFWPT 495
SV VLTTG+WPT
Sbjct: 578 SVHVLTTGYWPT 589
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
Frame = +2
Query: 8 DHFLQNSFNNDKIFKHMITSDFEYFLNLN----------NKSPEFLSLFIDGKLKKGEKG 157
D L+ SF ++ F + I FE+ +NL N+ E ++ F+D KL+ G KG
Sbjct: 417 DRILEESFAKNEAFSNTIKESFEHLINLRQISSSPFFQQNRPAELIAKFLDEKLRAGNKG 476
Query: 158 MSEQEIEAVLDKTMVLFRFLQEKDVFERYYKQ 253
SE+E+E +LDK +VLFRF+Q KDVFE +YK+
Sbjct: 477 TSEEELEGILDKVLVLFRFIQGKDVFEAFYKK 508
>05_01_0355 -
2774217-2774318,2774608-2774775,2774872-2775090,
2775176-2775319,2775485-2775767,2775874-2775929,
2776012-2776161,2776254-2776340,2776414-2776449,
2777100-2777162,2777247-2777327,2777407-2777496,
2777690-2777767,2777855-2778058,2778139-2778186,
2778262-2778447,2779879-2779978,2780121-2780260
Length = 744
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/73 (47%), Positives = 53/73 (72%)
Frame = +1
Query: 277 NKSVSDDSEKNMISKLKTECGCQFTSKLEGMFKDMTVSNTIMDEFKEHVLSSGLNLYGVD 456
+KS +D+ E+++++KLK +CG QFTSK+EGM D+TV+ +F+E V + G+D
Sbjct: 450 DKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFVAAHQELNPGID 509
Query: 457 LSVRVLTTGFWPT 495
L+V VLTTGFWP+
Sbjct: 510 LAVTVLTTGFWPS 522
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +2
Query: 14 FLQNSFNNDKIFKHMITSDFEYFLNLN---NKSPEFLSLFIDGKLKKG-EKGMSEQEIEA 181
++ F +F + FE F N + S E L+ F D LKKG + +S++ IE
Sbjct: 358 YVTECFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGCSEKLSDEAIED 417
Query: 182 VLDKTMVLFRFLQEKDVFERYYKQ 253
L+K + L ++ +KD+F +Y++
Sbjct: 418 ALEKVVRLLAYISDKDLFAEFYRK 441
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 516 NIPAAPRXAFEVFRSFYLANTPGRQLSLQPQLGSADLHA 632
N+PA EVF+ FY T R+L+ LG+ +++A
Sbjct: 529 NLPAEMVKCVEVFKEFYQTRTKHRKLTWIYSLGTCNINA 567
>01_04_0017 -
15113479-15113580,15113950-15114117,15115011-15115229,
15115303-15115446,15115558-15115840,15115936-15115991,
15116067-15116216,15116299-15116385,15116463-15116498,
15116746-15116808,15116887-15116967,15117053-15117142,
15117349-15117426,15117510-15117731,15117788-15117835,
15117948-15118133,15120910-15121009,15121107-15121246
Length = 750
Score = 74.5 bits (175), Expect = 7e-14
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = +1
Query: 277 NKSVSDDSEKNMISKLKTECGCQFTSKLEGMFKDMTVSNTIMDEFKEHVLSSGLNLYGVD 456
+KS +D+ E+++++KLK +CG QFTSK+EGM D+TV+ +F+E + + G+
Sbjct: 456 DKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQAKFEEFISTHSELNPGIA 515
Query: 457 LSVRVLTTGFWPT 495
L+V VLTTGFWP+
Sbjct: 516 LAVTVLTTGFWPS 528
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 14 FLQNSFNNDKIFKHMITSDFEYFLNLN---NKSPEFLSLFIDGKLKKG-EKGMSEQEIEA 181
++ + F +F + FE F N + S E L+ F D LKKG + +S++ IE
Sbjct: 364 YVTDCFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIED 423
Query: 182 VLDKTMVLFRFLQEKDVFERYYKQ 253
L+K + L ++ +KD+F +Y++
Sbjct: 424 TLEKVVRLLAYISDKDLFAEFYRK 447
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 516 NIPAAPRXAFEVFRSFYLANTPGRQLSLQPQLGSADLHA 632
N+PA EVF+ FY T R+L+ LG+ +++A
Sbjct: 535 NLPAEMVKCVEVFKEFYQTRTKHRKLTWIYSLGTCNINA 573
>01_04_0018 +
15128174-15128316,15128445-15128544,15129573-15129758,
15129877-15129924,15130006-15130209,15130476-15130565,
15130667-15130747,15130827-15130889,15131794-15131832,
15131914-15132000,15132103-15132252,15132331-15132386,
15132493-15132775,15132989-15133132,15133233-15133451,
15133528-15133695,15133868-15133969
Length = 720
Score = 71.3 bits (167), Expect = 7e-13
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = +1
Query: 277 NKSVSDDSEKNMISKLKTECGCQFTSKLEGMFKDMTVSNTIMDEFKEHVLSSGLNLYGVD 456
+K+ +D+ E+ ++SKLK G QFTSK+EGM KD+T++ F+E+V ++ + +D
Sbjct: 426 DKNTNDEHERILLSKLKQFFGGQFTSKMEGMLKDITLAKEHQSSFEEYVSNNPESNPLID 485
Query: 457 LSVRVLTTGFWPT 495
L+V VLTTG+WPT
Sbjct: 486 LNVTVLTTGYWPT 498
>07_01_1204 - 11469953-11470618
Length = 221
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 385 VSNTIMDEFKEHVLSSGLNLYGVDLSVRVLTTGFWPTQSATRSAT 519
VSNT D F + G+ G+ L VL+ G W Q + R+ T
Sbjct: 8 VSNTCRDSFGRSTTTVGITAVGIRLCRPVLSGGAWYQQGSGRAGT 52
>01_06_0994 +
33653055-33653144,33653219-33653310,33653483-33653580,
33653758-33653913,33654009-33654628,33654721-33654794,
33654905-33655156,33655250-33655367,33655468-33655639,
33655729-33656270
Length = 737
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +1
Query: 445 YGVDLSVRVLTTGFWPTQSATRSATYRPRPGXRSKSSEASTWRTLRGGSCPCSRSWAART 624
YG D+ + V+ TG WP + R Y P P + W+ G C W +
Sbjct: 134 YGEDIIIGVVDTGIWPESRSFRDEGYGPVP---------ARWK----GVCQVGEGWGSNN 180
Query: 625 CT 630
C+
Sbjct: 181 CS 182
>04_04_1584 +
34601927-34602144,34603324-34603510,34604239-34604496,
34604866-34604965,34608523-34608639,34608704-34608804,
34609035-34610141
Length = 695
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = -1
Query: 575 VRQVEASEDFERXPGRGRYVALRVALCVGQKPVVSTRTDRSTPYKFSPLESTCS 414
+RQ+E PG + V + G P + + PY+++ STCS
Sbjct: 64 IRQIERCHGRSPPPGASLASCVCVVVVEGNDPAAVGSQEIAVPYRYTRYSSTCS 117
>01_06_0312 + 28396860-28397951
Length = 363
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 487 WPTQSATRSATYRPRPGXRSKSSEASTW-RTLRGGSCPCSRSWAAR 621
WP + +AT R R +++EA+ W R +RG R + R
Sbjct: 291 WPIRRLDATATIRARLSGAGRAAEAAAWERDVRGPGLAAMRQFVGR 336
>02_02_0393 -
9711835-9712388,9712438-9712657,9713007-9713271,
9713409-9713476,9713587-9714209,9714307-9714462,
9714551-9714648,9714734-9714825,9714928-9715017
Length = 721
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 445 YGVDLSVRVLTTGFWPTQSATRSATYRPRP 534
YG D+ V V+ +G WPT + Y P P
Sbjct: 134 YGEDVIVGVIDSGIWPTSRSFDDNGYGPVP 163
>02_02_0392 -
9649858-9650405,9650499-9650670,9650788-9650926,
9651113-9651334,9651422-9651495,9653042-9653661,
9653810-9653965,9655250-9655347,9655443-9655534,
9655891-9655977
Length = 735
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 442 LYGVDLSVRVLTTGFWPTQSATRSATYRPRP 534
+YG D+ + V+ TG WP + Y P P
Sbjct: 132 MYGEDVIIGVVDTGIWPESPSFNDDGYGPVP 162
>01_05_0039 - 17486716-17487855
Length = 379
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 116 SLFIDGKLKKGEKGMSEQEIEAVLDK 193
S ++ G+ KKG+K M+ +E + +LD+
Sbjct: 353 SSYVYGEYKKGDKAMANEEDQGILDR 378
>01_06_0998 +
33685051-33685143,33685231-33685322,33685490-33685587,
33686671-33686826,33686927-33687546,33687888-33687958,
33688072-33688326,33688426-33688543,33688671-33688842,
33688928-33689469
Length = 738
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/62 (25%), Positives = 25/62 (40%)
Frame = +1
Query: 445 YGVDLSVRVLTTGFWPTQSATRSATYRPRPGXRSKSSEASTWRTLRGGSCPCSRSWAART 624
YG D+ + ++ TG WP + Y P P S W+ G C ++W
Sbjct: 135 YGEDVIIGMIDTGIWPESRSFSDHGYGPIP---------SRWK----GVCQLGQAWGPTN 181
Query: 625 CT 630
C+
Sbjct: 182 CS 183
>02_02_0400 + 9836045-9837115,9837474-9838577
Length = 724
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +1
Query: 556 EASTWRTLRGGSCPCSRSWAARTCTLLXVPRPXSPXXRHAAL 681
E+ W T GG W+ + TL P P +P A L
Sbjct: 189 ESMGWLTASGGKLFADLEWSGKMATLEFSPSPATPTLASAPL 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,920,401
Number of Sequences: 37544
Number of extensions: 301580
Number of successful extensions: 1015
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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