Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0341.Seq
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   3.4  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   4.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   6.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.0  

>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 477 GYHCQDRGNLGFFKGAFSNVLRGTG 551
           GY C+ R    F    F N ++GTG
Sbjct: 376 GYGCEHRWRQIFNMVGFRNAVQGTG 400


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 477 GYHCQDRGNLGFFKGAFSNVLRGTG 551
           GY C+ R    F    F N ++GTG
Sbjct: 375 GYVCEHRWRQIFNMVGFRNAVQGTG 399


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 585 KKVL*I*RKNCYHNFYVIPCRSHFPFRSCIIR 680
           +KVL + +K      Y+   +SH PF + ++R
Sbjct: 247 RKVLEVLQKMSVEEMYLAAEKSHDPFIASLVR 278


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = -1

Query: 598 YRTFLISSYKTSTKAPPVPLRTLEKAPLKKPRFPRSWQ 485
           Y+  L        + PP P     K   +KPR PR  Q
Sbjct: 235 YKGRLTDEQLKELENPPTPKPRPTKVSRRKPRPPRPTQ 272


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 510 FFKGAFSNVLRGTGGAFVLVLYDEI 584
           F    ++  L  TGG  V+ L DEI
Sbjct: 507 FRPNTYNRFLAATGGDHVISLIDEI 531


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,906
Number of Sequences: 336
Number of extensions: 3199
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)