Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0337.Seq
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 130 8e-31
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 130 8e-31
Z99271-4|CAB16474.1| 105|Caenorhabditis elegans Hypothetical pr... 67 1e-11
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 31 1.1
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 31 1.1
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 31 1.1
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 31 1.1
AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical ... 29 2.6
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 29 4.6
U28928-3|AAA68336.1| 236|Caenorhabditis elegans Hypothetical pr... 29 4.6
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81076-1|CAB03050.2| 186|Caenorhabditis elegans Hypothetical pr... 28 8.0
U40951-4|AAG01568.1| 756|Caenorhabditis elegans Temporarily ass... 28 8.0
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 130 bits (315), Expect = 8e-31
Identities = 58/114 (50%), Positives = 82/114 (71%)
Frame = +3
Query: 261 RAPYVSEMKFFNETSYEPIPIYRVMDNNGQIIDKNEEPNLDKATLINMYKTMVQLSHMDK 440
+A + +++ N +PIYRV + G +IDK+++PN D+ T + MYKTM QL+ MD+
Sbjct: 42 KAAFTEKLEIVNADDTPALPIYRVTNAVGDVIDKSQDPNFDEQTSLKMYKTMTQLNIMDR 101
Query: 441 ILYESQRQGRISFYMTNYGEEGIT*AAPRALSPKDLVFSQYREVGVFLYRGMTV 602
ILY+SQRQGRISFYMT++GEEG + AL P+DL++ QYRE GV L+RG T+
Sbjct: 102 ILYDSQRQGRISFYMTSFGEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTM 155
Score = 56.8 bits (131), Expect = 2e-08
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +1
Query: 613 VNQCYGNCEDPGKGRQMPVHYGSKHHNMVTIS 708
+NQCYGN +D GKGRQMP+H+G+K N VTIS
Sbjct: 159 MNQCYGNADDLGKGRQMPMHFGTKERNFVTIS 190
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 130 bits (315), Expect = 8e-31
Identities = 58/114 (50%), Positives = 82/114 (71%)
Frame = +3
Query: 261 RAPYVSEMKFFNETSYEPIPIYRVMDNNGQIIDKNEEPNLDKATLINMYKTMVQLSHMDK 440
+A + +++ N +PIYRV + G +IDK+++PN D+ T + MYKTM QL+ MD+
Sbjct: 41 KAAFTEKLEIVNADDTPALPIYRVTNAVGDVIDKSQDPNFDEQTSLKMYKTMTQLNIMDR 100
Query: 441 ILYESQRQGRISFYMTNYGEEGIT*AAPRALSPKDLVFSQYREVGVFLYRGMTV 602
ILY+SQRQGRISFYMT++GEEG + AL P+DL++ QYRE GV L+RG T+
Sbjct: 101 ILYDSQRQGRISFYMTSFGEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTM 154
Score = 56.8 bits (131), Expect = 2e-08
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +1
Query: 613 VNQCYGNCEDPGKGRQMPVHYGSKHHNMVTIS 708
+NQCYGN +D GKGRQMP+H+G+K N VTIS
Sbjct: 158 MNQCYGNADDLGKGRQMPMHFGTKERNFVTIS 189
>Z99271-4|CAB16474.1| 105|Caenorhabditis elegans Hypothetical
protein Y43F4A.4 protein.
Length = 105
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +3
Query: 243 SRISGAR-APYVSEMKFFNETSYEPIPIYRVMDNNGQIIDKNEEPNLDKATLINMYKTMV 419
S+ G R A + +++ N +PIYRV + G +IDK+++PN D+ +L+ MYKTM
Sbjct: 34 SKYLGHRIAAFTEKLEIVNADDTPALPIYRVTNAVGDVIDKSQDPNFDEQSLLKMYKTMT 93
Query: 420 QLSHMDKILYES 455
QL+ MD+ILY+S
Sbjct: 94 QLNIMDRILYDS 105
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +3
Query: 351 IIDKNEEPNLDKATLINMYKTMVQL---SHMDKILYESQRQGRISFYMTNYGEEGIT*AA 521
I+D+N++ +DK+ L ++Y +M Q+ S +D ++ E+ + ++T +GE +T
Sbjct: 35 IMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGER-LTGTD 93
Query: 522 PRA 530
P A
Sbjct: 94 PEA 96
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +3
Query: 351 IIDKNEEPNLDKATLINMYKTMVQL---SHMDKILYESQRQGRISFYMTNYGEEGIT*AA 521
I+D+N++ +DK+ L ++Y +M Q+ S +D ++ E+ + ++T +GE +T
Sbjct: 35 IMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGER-LTGTD 93
Query: 522 PRA 530
P A
Sbjct: 94 PEA 96
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +3
Query: 351 IIDKNEEPNLDKATLINMYKTMVQL---SHMDKILYESQRQGRISFYMTNYGEEGIT*AA 521
I+D+N++ +DK+ L ++Y +M Q+ S +D ++ E+ + ++T +GE +T
Sbjct: 35 IMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGER-LTGTD 93
Query: 522 PRA 530
P A
Sbjct: 94 PEA 96
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +3
Query: 351 IIDKNEEPNLDKATLINMYKTMVQL---SHMDKILYESQRQGRISFYMTNYGEEGIT*AA 521
I+D+N++ +DK+ L ++Y +M Q+ S +D ++ E+ + ++T +GE +T
Sbjct: 35 IMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGER-LTGTD 93
Query: 522 PRA 530
P A
Sbjct: 94 PEA 96
>AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical
protein Y51A2D.12 protein.
Length = 334
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3
Query: 185 FTIFVIDLFLTSLLLTS 135
FT+FVIDLFLTSL +++
Sbjct: 227 FTVFVIDLFLTSLTVSN 243
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = +3
Query: 363 NEEPNLDKATLINMYKTMVQLSHMDKILYESQRQGRISFYMTNY-GEEGIT*AAPRALSP 539
N L++ + Y+ M + M+ ++ +I + Y G+E A++
Sbjct: 62 NTSVTLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTE 121
Query: 540 KDLVFSQYREVGVFLYRGMTVTETCEPVLRKLRGS 644
D V + YR G G TVTE + ++ G+
Sbjct: 122 GDAVITAYRCHGWTWLLGATVTEVLAELTGRVAGN 156
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = +3
Query: 363 NEEPNLDKATLINMYKTMVQLSHMDKILYESQRQGRISFYMTNY-GEEGIT*AAPRALSP 539
N L++ + Y+ M + M+ ++ +I + Y G+E A++
Sbjct: 45 NTSVTLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTE 104
Query: 540 KDLVFSQYREVGVFLYRGMTVTETCEPVLRKLRGS 644
D V + YR G G TVTE + ++ G+
Sbjct: 105 GDAVITAYRCHGWTWLLGATVTEVLAELTGRVAGN 139
>U28928-3|AAA68336.1| 236|Caenorhabditis elegans Hypothetical
protein C44B7.5 protein.
Length = 236
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 167 DLFLTSLLLTSIACFQKSNTKVYDCTDSRKYC 72
++ L L++S+ S T + DC D KYC
Sbjct: 7 NMILKLALISSLLALAASRTHLTDCLDDHKYC 38
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -1
Query: 475 EMRPCLCDSYRILSIWLSCTMVLYMLISVALSKFGSSFLSMICPLLSI 332
EMR C S ++ + CTM + S++L FG + LS+ P+ +
Sbjct: 202 EMRSC---SLELIPVPAMCTMFRELPTSISLLDFGDNHLSIFPPIFHL 246
>Z81076-1|CAB03050.2| 186|Caenorhabditis elegans Hypothetical
protein F35C5.1 protein.
Length = 186
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 676 RNGPASVSLSPDPRSFRNTGSQVSVTVIPRYKNTPTSLY*LKTKSFGESAR 524
R P + S+S +S+R +G+QVSV + T ++ L G++AR
Sbjct: 82 RRPPQASSMSSSGKSYRKSGNQVSVRGSQKSDTTDSAKTELIEMPLGKAAR 132
>U40951-4|AAG01568.1| 756|Caenorhabditis elegans Temporarily
assigned gene nameprotein 130 protein.
Length = 756
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +1
Query: 289 SSTKLVMSQFRFIELWIITDRSSTKMKNRTWIRLR*LTCTKPWYN*AIWIKFYMN 453
+S LV +F F +W + R +W+ R L+C P Y ++ +N
Sbjct: 566 ASMLLVSLEFYFKGIWTLNLRELRNSIRLSWVSSRHLSCVVPAYKARFFVILLLN 620
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,942,342
Number of Sequences: 27780
Number of extensions: 429275
Number of successful extensions: 1253
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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