Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0336.Seq
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.49 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    25   0.85 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    25   0.85 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    25   0.85 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   1.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   3.4  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   6.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   6.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   6.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.9  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   7.9  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   7.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.9  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
 Frame = -2

Query: 119 KSNTKVY-----DCTDSRKYCCSYKIQLYVHPSSPS 27
           KS++ VY     DC+ + KYC S KI L  +  +P+
Sbjct: 279 KSHSNVYRYSCRDCSYATKYCHSLKIHLRRYGHTPN 314


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 567 EVGVFLYRGMTVTELVNQCYGNCEDPGKGRQMPVHYGSKHH 689
           +VG++ +     T   +  Y    D    +QMP HY + H+
Sbjct: 4   DVGMYGHHSQHGTYPSDNYYNYTSDIPNAQQMPPHYSNYHY 44


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 567 EVGVFLYRGMTVTELVNQCYGNCEDPGKGRQMPVHYGSKHH 689
           +VG++ +     T   +  Y    D    +QMP HY + H+
Sbjct: 4   DVGMYGHHSQHGTYPSDNYYNYTSDIPNAQQMPPHYSNYHY 44


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 567 EVGVFLYRGMTVTELVNQCYGNCEDPGKGRQMPVHYGSKHH 689
           +VG++ +     T   +  Y    D    +QMP HY + H+
Sbjct: 4   DVGMYGHHSQHGTYPSDNYYNYTSDIPNAQQMPPHYSNYHY 44


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
 Frame = -2

Query: 119 KSNTKVY-----DCTDSRKYCCSYKIQL 51
           KS++ VY     DC+ + KYC S KI L
Sbjct: 37  KSHSNVYRYSCRDCSYATKYCHSLKIHL 64


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 56  QLYVHPSSPSK 24
           ++Y+HP SPSK
Sbjct: 100 RIYMHPESPSK 110


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 630 NCEDPGKGRQMPVHYGS 680
           N +DP + RQM V +GS
Sbjct: 266 NLKDPCRRRQMYVDFGS 282


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 457 CDSYRILSIWLSCTMVLY 404
           CD   IL  W+ C + L+
Sbjct: 317 CDIATILDFWVRCVLSLH 334


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -2

Query: 173 VIDLFLTSLLLTSIACFQKSNTKVYDCTDSRKYCCSYKI 57
           V D+F  +L+L    C   S + +Y C    ++  ++ I
Sbjct: 220 VNDIFGWTLILILAKCITSSLSSLYTCIAGYEFNANFTI 258


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 666 PASVSLSPDPRS 631
           P+S S SP+PRS
Sbjct: 285 PSSTSSSPEPRS 296


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 667 TGICLPFPGSSQFP*HWFTSSVTVIP 590
           TG+  P PG S  P H  +    V P
Sbjct: 227 TGLIPPHPGLSPHPPHLSSHPAIVTP 252


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 667 TGICLPFPGSSQFP*HWFTSSVTVIP 590
           TG+  P PG S  P H  +    V P
Sbjct: 119 TGLIPPHPGLSPHPPHLSSHPAIVTP 144


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
          optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 56 QLYVHPSSPS 27
          ++Y+HP SPS
Sbjct: 53 RMYIHPDSPS 62


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
          optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 56 QLYVHPSSPS 27
          ++Y+HP SPS
Sbjct: 53 RMYIHPDSPS 62


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 230 PFCAVSGLVRVDKSHFTIFVIDLFLTS 150
           P+C  S + +V      +F+ + F+TS
Sbjct: 181 PYCFNSSVYKVFPVEHLLFIANAFITS 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,820
Number of Sequences: 336
Number of extensions: 4643
Number of successful extensions: 27
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)