BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0336.Seq
(741 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protei... 24 4.3
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 5.7
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 5.7
Z81292-1|CAB03593.1| 209|Anopheles gambiae GSTD1-6 protein prot... 23 7.5
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 23 7.5
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 23 7.5
AF071160-1|AAC79995.1| 209|Anopheles gambiae glutathione S-tran... 23 7.5
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 23 9.9
>Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protein
precursor protein.
Length = 260
Score = 24.2 bits (50), Expect = 4.3
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 439 LSIWLSCTMVLYMLISVALSKFGSSFLSMICP 344
++IW++C +L +++S +S G S +CP
Sbjct: 1 MAIWIACATLLLVVLS-GVSAGGKYCSSDLCP 31
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.8 bits (49), Expect = 5.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 670 WTGICLPFPGS 638
WTG+ LPFP +
Sbjct: 878 WTGVVLPFPAN 888
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.8 bits (49), Expect = 5.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 670 WTGICLPFPGS 638
WTG+ LPFP +
Sbjct: 879 WTGVVLPFPAN 889
>Z81292-1|CAB03593.1| 209|Anopheles gambiae GSTD1-6 protein
protein.
Length = 209
Score = 23.4 bits (48), Expect = 7.5
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 456 VIHIEFYPYGSVVPWFCTC 400
V +F PY +V WF C
Sbjct: 168 VAGFDFAPYPNVAAWFARC 186
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 23.4 bits (48), Expect = 7.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 263 SCAGNSAILPPPFCAVSGLVRVDKSHFTIF 174
+C GN + LPPP A +R + T F
Sbjct: 150 NCNGNFSYLPPPTAADGLSMRDENESITPF 179
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 23.4 bits (48), Expect = 7.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 65 MNNNIFENQCNRK 103
+ NNI N+CNRK
Sbjct: 53 VTNNIVHNRCNRK 65
>AF071160-1|AAC79995.1| 209|Anopheles gambiae glutathione
S-transferase protein.
Length = 209
Score = 23.4 bits (48), Expect = 7.5
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 456 VIHIEFYPYGSVVPWFCTC 400
V +F PY +V WF C
Sbjct: 168 VAGFDFAPYPNVAAWFARC 186
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 23.0 bits (47), Expect = 9.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 83 RKYCCSYKIQLYVHPSSPSK 24
+K C Y + LY PSS S+
Sbjct: 237 KKVCTGYHVSLYPCPSSGSE 256
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,727
Number of Sequences: 2352
Number of extensions: 17977
Number of successful extensions: 32
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -