Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0330.Seq
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063786-1|AAH63786.1| 1031|Homo sapiens KIAA0664 protein protein.     41   0.003
AK125717-1|BAC86257.1|  888|Homo sapiens F11).  protein.               41   0.003
AK023003-1|BAB14354.1|  720|Homo sapiens protein ( Homo sapiens ...    41   0.003
AB014564-1|BAA31639.1| 1134|Homo sapiens KIAA0664 protein protein.     41   0.003

>BC063786-1|AAH63786.1| 1031|Homo sapiens KIAA0664 protein protein.
          Length = 1031

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = +3

Query: 102 FDVRFNPDVYSAGIKH-AAAPEHLAKQRHLVKEAAXFXLTTXI 227
           FD+RFNPD++S G++   +  + +  Q+ L+K+AA F L+  I
Sbjct: 435 FDIRFNPDIFSPGVRFPESCQDEVRDQKQLLKDAAAFLLSCQI 477



 Score = 38.3 bits (85), Expect = 0.015
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +2

Query: 230 GLRAGVRGESVAPXDGAGLTEXLHARGINVRYLGRVALALAAHPS 364
           GL       +V P DGA L E +  RGIN+RYLG+V   +   P+
Sbjct: 479 GLVKDCMEHAVLPVDGATLAEVMRQRGINMRYLGKVLELVLRSPA 523


>AK125717-1|BAC86257.1|  888|Homo sapiens F11).  protein.
          Length = 888

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = +3

Query: 102 FDVRFNPDVYSAGIKH-AAAPEHLAKQRHLVKEAAXFXLTTXI 227
           FD+RFNPD++S G++   +  + +  Q+ L+K+AA F L+  I
Sbjct: 713 FDIRFNPDIFSPGVRFPESCQDEVRDQKQLLKDAAAFLLSCQI 755



 Score = 38.3 bits (85), Expect = 0.015
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +2

Query: 230 GLRAGVRGESVAPXDGAGLTEXLHARGINVRYLGRVALALAAHPS 364
           GL       +V P DGA L E +  RGIN+RYLG+V   +   P+
Sbjct: 757 GLVKDCMEHAVLPVDGATLAEVMRQRGINMRYLGKVLELVLRSPA 801


>AK023003-1|BAB14354.1|  720|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12941 fis, clone NT2RP2005116, moderately
           similar to PUTATIVE EUKARYOTIC TRANSLATION INITIATION
           FACTOR 3 ALPHA SUBUNIT. ).
          Length = 720

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = +3

Query: 102 FDVRFNPDVYSAGIKH-AAAPEHLAKQRHLVKEAAXFXLTTXI 227
           FD+RFNPD++S G++   +  + +  Q+ L+K+AA F L+  I
Sbjct: 317 FDIRFNPDIFSPGVRFPESCQDEVRDQKQLLKDAAAFLLSCQI 359



 Score = 38.3 bits (85), Expect = 0.015
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +2

Query: 230 GLRAGVRGESVAPXDGAGLTEXLHARGINVRYLGRVALALAAHPS 364
           GL       +V P DGA L E +  RGIN+RYLG+V   +   P+
Sbjct: 361 GLVKDCMEHAVLPVDGATLAEVMRQRGINMRYLGKVLELVLRSPA 405


>AB014564-1|BAA31639.1| 1134|Homo sapiens KIAA0664 protein protein.
          Length = 1134

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = +3

Query: 102 FDVRFNPDVYSAGIKH-AAAPEHLAKQRHLVKEAAXFXLTTXI 227
           FD+RFNPD++S G++   +  + +  Q+ L+K+AA F L+  I
Sbjct: 538 FDIRFNPDIFSPGVRFPESCQDEVRDQKQLLKDAAAFLLSCQI 580



 Score = 38.3 bits (85), Expect = 0.015
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +2

Query: 230 GLRAGVRGESVAPXDGAGLTEXLHARGINVRYLGRVALALAAHPS 364
           GL       +V P DGA L E +  RGIN+RYLG+V   +   P+
Sbjct: 582 GLVKDCMEHAVLPVDGATLAEVMRQRGINMRYLGKVLELVLRSPA 626


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,190,663
Number of Sequences: 237096
Number of extensions: 444091
Number of successful extensions: 1181
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)